Evidence map›Paper›PMID 31897745›Full record

ArticleMarine biotechnology (New York, N.Y.)2020

Construction of High-Density Genetic Map and Mapping of Sex-Related Loci in the Yellow Catfish (Pelteobagrus fulvidraco).

Dong Gao, Min Zheng, Genmei Lin, Wenyu Fang, Jing Huang, Jianguo Lu, Xiaowen Sun

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Article in Marine biotechnology (New York, N.Y.), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Dong GaoSchool of Marine Sciences, Sun Yat-sen University, Guangzhou, China.
Min ZhengSchool of Marine Sciences, Sun Yat-sen University, Guangzhou, China. zhengm7@mail.sysu.edu.cn.
Genmei LinSchool of Marine Sciences, Sun Yat-sen University, Guangzhou, China.
Wenyu FangSchool of Marine Sciences, Sun Yat-sen University, Guangzhou, China.
Jing HuangSchool of Marine Sciences, Sun Yat-sen University, Guangzhou, China.
Jianguo LuSchool of Marine Sciences, Sun Yat-sen University, Guangzhou, China. lujianguo@mail.sysu.edu.cn.ORCID http://orcid.org/0000-0002-3966-8812
Xiaowen SunHeilongjiang River Fisheries Research Institute, Chinese Academy of Fishery Sciences, Harbin, China.
Sun Yat-sen University · CNChinese Academy of Fishery Sciences · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The yellow catfish (Pelteobagrus fulvidraco) is a very important aquaculture species distributed in freshwater area of China. All-male yellow catfish is very popular in aquaculture because of their significant sex dimorphism phenomena. The males grow much faster than females in full-sibling family. However, the sex dimorphism mechanism is still unclear in yellow catfish. In order to better understand the genetic basis of yellow catfish sexual dimorphism, it is vital to map the sex-related traits and localize the candidate genes across yellow catfish whole genome. Here, we constructed a high-density linkage map of yellow catfish using genotyping-by-sequencing (GBS) strategy. A total of 5705 single-nucleotide polymorphism (SNP) markers were mapped to 26 different linkage groups (LGs) using 184 F1 offspring. The total genetic map length was 3071.59 cM, with an average interlocus distance of 0.54 cM. Eleven significant sex-related QTLs in yellow catfish were identified. Six sex-related genes were identified from the region of reference genome near these QTLs including amh, gnrhr, vasa, lnnr1, foxl2, and bmp15. The high-density genetic linkage map provides valuable resources for yellow catfish molecular assistant breeding and elucidating sex differentiation process. Moreover, the comparative genomic study was analyzed among yellow catfish, channel catfish, and zebrafish. It revealed highly conserved chromosomal distribution between yellow catfish and channel catfish.

Indexed as

Quantitative Trait LociSex CharacteristicsAnimalsAquacultureCatfishesChromosome MappingFemaleGenetic LinkageGenomicsMalePolymorphism, Single NucleotideGenetic linkage mapQuantitative trait locusSex-related genesYellow catfish

Identifiers

PMID31897745
OpenAlexW2998505189

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.