Evidence map›Paper›PMID 31896815›Full record

ArticleLaboratory investigation; a journal of technical methods and pathology2020

Accelerated instability testing reveals quantitative mass spectrometry overcomes specimen storage limitations associated with PD-L1 immunohistochemistry.

Alexander Haragan, Daniel C Liebler, Dimple M Das, Michael D Soper, Ryan D Morrison, Robbert J C Slebos, Bradley L Ackermann, Jeff A Fill, Andrew E Schade, John R Gosney and 1 more

Open access · hybridAbstract read
In one paragraph

Article in Laboratory investigation; a journal of technical methods and pathology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.5field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 29 citations in OpenAlex.

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  12. Tissue Age Affects Antigenicity and Scoring for the 22C3 Immunohistochemistry Companion Diagnostic Test.Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc · 2023
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  14. Rejuvenated Vintage Tissue Sections Highlight Individual Antigen Fate During Processing and Long-term Storage.The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

Alexander HaraganInstitute of Translational Medicine, University of Liverpool, Liverpool, UK.ORCID http://orcid.org/0000-0002-9747-563X
Daniel C LieblerProtypia, LLC, Nashville, TN, USA.
Dimple M DasLilly Research Laboratories, Eli Lilly and Company, Indianapolis, IN, USA.
Michael D SoperLilly Research Laboratories, Eli Lilly and Company, Indianapolis, IN, USA.
Ryan D MorrisonProtypia, LLC, Nashville, TN, USA.
Robbert J C SlebosH. Lee Moffitt Cancer Center, Tampa, FL, USA.
Bradley L AckermannLilly Research Laboratories, Eli Lilly and Company, Indianapolis, IN, USA.
Jeff A FillLilly Research Laboratories, Eli Lilly and Company, Indianapolis, IN, USA.
Andrew E SchadeLilly Research Laboratories, Eli Lilly and Company, Indianapolis, IN, USA.
John R GosneyInstitute of Translational Medicine, University of Liverpool, Liverpool, UK.
Aaron M GruverInstitute of Translational Medicine, University of Liverpool, Liverpool, UK. gruver_aaron_m@lilly.com.
Eli Lilly (United States) · USUniversity of Liverpool · GBMoffitt Cancer Center · US

Funding

Medical Research Council MR/N025989/1Medical Research Council MR/R016909/1
6 · The paper itself

Abstract

Immunohistochemistry (IHC) using formalin-fixed, paraffin embedded (FFPE) tissue is limited by epitope masking, posttranslational modification and immunoreactivity loss that occurs in stored tissue by poorly characterized mechanisms. Conformational epitopes recognized by many programmed-death-ligand-1 (PD-L1) IHC assays are particularly susceptible to degradation and provide an ideal model for understanding signal loss in stored FFPE tissue. Here we assessed 1206 tissue sections to evaluate environmental factors impacting immunoreactivity loss. PD-L1 IHC using four antibodies (22C3, 28-8, E1L3N, and SP142), raised against intracellular and extracellular epitopes, was assessed in stored FFPE tissue alongside quantitative mass spectrometry (MS). Global proteome analyses were used to assess proteome-wide oxidation across an inventory of 3041 protein groups (24,737 distinct peptides). PD-L1 quantitation correlated well with IHC expression on unaged sections (R

Indexed as

B7-H1 AntigenHumansImmunohistochemistryMass SpectrometryNeoplasmsProteomeProteomicsSpecimen HandlingB7-H1 AntigenCD274 protein, humanProteome

Identifiers

PMID31896815
PMCPMC7280177
OpenAlexW2998135460

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.