Evidence map›Paper›PMID 31896565›Full record

ArticleGenetics2020

A Microbe Associated with Sleep Revealed by a Novel Systems Genetic Analysis of the Microbiome in Collaborative Cross Mice.

Jason A Bubier, Vivek M Philip, Christopher Quince, James Campbell, Yanjiao Zhou, Tatiana Vishnivetskaya, Suman Duvvuru, Rachel Hageman Blair, Juliet Ndukum, Kevin D Donohue and 8 more

Open access · hybridAbstract read
In one paragraph

Article in Genetics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 36 citations in OpenAlex.

  1. Review
  2. Article
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  6. Review
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  9. Article
  10. Functionally distinct regions of the locusFrontiers in immunology · 2023
    Article
  11. Article
  12. Host genetic control of gut microbiome composition.Mammalian genome : official journal of the International Mammalian Genome Society · 2021
    Review
  13. Article
  14. Interactions between host genetics and gut microbiota determine susceptibility to CNS autoimmunity.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 7 institutions in 2 countries.

Jason A BubierThe Jackson Laboratory, Bar Harbor, Maine 04609.ORCID 0000-0001-5013-1234
Vivek M PhilipThe Jackson Laboratory, Bar Harbor, Maine 04609.
Christopher QuinceSchool of Engineering, University of Glasgow, G12 8LT, United Kingdom.
James CampbellBiosciences Division, Oak Ridge National Laboratory, Tennessee 37830.
Yanjiao ZhouThe Jackson Laboratory, Bar Harbor, Maine 04609.
Tatiana VishnivetskayaGenome Science and Technology Program, University of Tennessee, Tennessee 37830.
Suman DuvvuruGenome Science and Technology Program, University of Tennessee, Tennessee 37830.
Rachel Hageman BlairDepartment of Biostatistics, State University of New York at Buffalo, New York, 14260.
Juliet NdukumThe Jackson Laboratory, Bar Harbor, Maine 04609.
Kevin D DonohueSignal Solutions, LLC, Lexington, Kentucky 40506.
Carmen M FosterBiosciences Division, Oak Ridge National Laboratory, Tennessee 37830.ORCID 0000-0002-0927-9859
David J MellertThe Jackson Laboratory, Bar Harbor, Maine 04609.
George WeinstockThe Jackson Laboratory, Bar Harbor, Maine 04609.ORCID 0000-0002-2997-4592
Cymbeline T CuliatGenome Science and Technology Program, University of Tennessee, Tennessee 37830.
Bruce F O'HaraSignal Solutions, LLC, Lexington, Kentucky 40506.
Anthony V PalumboBiosciences Division, Oak Ridge National Laboratory, Tennessee 37830.
Mircea PodarBiosciences Division, Oak Ridge National Laboratory, Tennessee 37830.
Elissa J CheslerThe Jackson Laboratory, Bar Harbor, Maine 04609 Elissa.Chesler@jax.org.ORCID 0000-0002-5642-5062
Jackson Laboratory · USOak Ridge National Laboratory · USUniversity of Kentucky · USNorthwest Missouri State University · USUniversity at Buffalo, State University of New York · USUniversity of Glasgow · GBUniversity of Tennessee at Knoxville · US

Funding

Project 5: Circadian RhythmsP50DA039841 · NIDA · JACKSON LABORATORY · PI LAURA G REINHOLDT · 2016 to 2026
$26.2M
Discovery of Addiction-Related Genes with Advanced Mouse ResourcesR01DA037927 · NIDA · JACKSON LABORATORY · PI CHESLER, ELISSA J · 2015 to 2025
$8.1M
Genetic Control of Addiction by Host and MicrobiomeU01DA043809 · NIDA · JACKSON LABORATORY · PI BUBIER, JASON A, ZHOU, YANJIAO · 2018 to 2022
$4.0M
Medical Research Council MR/M50161X/1
6 · The paper itself

Abstract

The microbiome influences health and disease through complex networks of host genetics, genomics, microbes, and environment. Identifying the mechanisms of these interactions has remained challenging. Systems genetics in laboratory mice (

Indexed as

AnimalsAnti-Bacterial AgentsBacteroidesChromosomes, Human, Pair 7Gastrointestinal MicrobiomeGenomicsGenotypeGTPase-Activating ProteinsGuanine Nucleotide Exchange FactorsHumansMiceObesityReceptors, LeptinSleepAnti-Bacterial AgentsDock7 protein, mouseGTPase-Activating ProteinsGuanine Nucleotide Exchange Factorsleptin receptor, mouseReceptors, Leptinbehaviorbioinformaticsgeneticsgenomicssleep

Identifiers

PMID31896565
PMCPMC7054020
OpenAlexW2997753052

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.