Evidence map›Paper›PMID 31895563›Full record

ArticleJournal of medicinal chemistry2020

Discovery of a Small Side Cavity in Sphingosine Kinase 2 that Enhances Inhibitor Potency and Selectivity.

Christopher D Sibley, Emily A Morris, Yugesh Kharel, Anne M Brown, Tao Huang, David R Bevan, Kevin R Lynch, Webster L Santos

Open access · greenAbstract read
In one paragraph

Article in Journal of medicinal chemistry, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
  2. Loss of sphingosine kinase 2 protects against cisplatin-induced kidney injury.American journal of physiology. Renal physiology · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Christopher D SibleyDepartment of Chemistry , Virginia Tech , Blacksburg , Virginia 24061 , United States.
Emily A MorrisDepartment of Chemistry , Virginia Tech , Blacksburg , Virginia 24061 , United States.
Yugesh KharelDepartment of Pharmacology , University of Virginia , Charlottesville , Virginia 22908 , United States.
Anne M BrownDepartment of Biochemistry , Virginia Tech , Blacksburg , Virginia 24061 , United States.
Tao HuangDepartment of Pharmacology , University of Virginia , Charlottesville , Virginia 22908 , United States.
David R BevanDepartment of Biochemistry , Virginia Tech , Blacksburg , Virginia 24061 , United States.
Kevin R LynchDepartment of Pharmacology , University of Virginia , Charlottesville , Virginia 22908 , United States.ORCID 0000-0002-7376-922X
Webster L SantosDepartment of Chemistry , Virginia Tech , Blacksburg , Virginia 24061 , United States.ORCID 0000-0002-4731-8548
Virginia Tech · USUniversity of Virginia · US

Funding

MD-PHAR Controlling sphingosine 1-phosphate synthesis and traffickingR01GM121075 · NIGMS · UNIVERSITY OF VIRGINIA · PI LYNCH, KEVIN R., SANTOS, WEBSTER L · 2016 to 2020
$2.1M
In Vivo Probes of Sphingosine Kinase FunctionR01GM104366 · NIGMS · VIRGINIA POLYTECHNIC INST AND ST UNIV · PI LYNCH, KEVIN R., SANTOS, WEBSTER L · 2013 to 2015
$1.1M
NIGMS NIH HHS R01 GM104366NIGMS NIH HHS R01 GM121075
6 · The paper itself

Abstract

The sphingosine-1-phosphate (S1P) signaling pathway is an attractive drug target due to its involvement in immune cell chemotaxis and vascular integrity. The formation of S1P is catalyzed by sphingosine kinase 1 or 2 (SphK1 or SphK2) from sphingosine (Sph) and ATP. Inhibition of SphK1 and SphK2 to attenuate levels of S1P has been reported to be efficacious in animal models of diseases such as cancer, sickle cell disease, and renal fibrosis. While inhibitors of both SphKs have been reported, improvements in potency and selectivity are still needed. Toward that end, we performed structure-activity relationship profiling of

Indexed as

AmidinesAnimalsBinding SitesDrug DiscoveryHumansMice, Inbred C57BLMolecular Docking SimulationMolecular StructureOxadiazolesPhosphotransferases (Alcohol Group Acceptor)Protein BindingProtein Kinase InhibitorsPyrrolidinesSaccharomyces cerevisiaeSphingosine KinaseStructure-Activity RelationshipAmidinesOxadiazolesPhosphotransferases (Alcohol Group Acceptor)Protein Kinase InhibitorsPyrrolidinesSphingosine Kinasesphingosine kinase 2, humanSphK2-selective inhibitor 10

Identifiers

PMID31895563
PMCPMC8215855
OpenAlexW2997843354

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.