Evidence map›Paper›PMID 31895039›Full record

ArticleeLife2020

The CDK Pef1 and protein phosphatase 4 oppose each other for regulating cohesin binding to fission yeast chromosomes.

Adrien Birot, Marta Tormos-Pérez, Sabine Vaur, Amélie Feytout, Julien Jaegy, Dácil Alonso Gil, Stéphanie Vazquez, Karl Ekwall, Jean-Paul Javerzat

Open access · greenAbstract read
In one paragraph

Article in eLife, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.1field-weighted citation impact, top 58% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 1 citations in OpenAlex.

  1. Effects ofExperimental and therapeutic medicine · 2026
    Article
  2. Article
  3. Cyclin-dependent kinases: Masters of the eukaryotic universe.Wiley interdisciplinary reviews. RNA · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Adrien Birot *Institut de Biochimie et Génétique Cellulaires, UMR 5095 CNRS - Université de Bordeaux, Bordeaux, France.
Marta Tormos-Pérez *Institut de Biochimie et Génétique Cellulaires, UMR 5095 CNRS - Université de Bordeaux, Bordeaux, France.
Sabine Vaur *Institut de Biochimie et Génétique Cellulaires, UMR 5095 CNRS - Université de Bordeaux, Bordeaux, France.
Amélie FeytoutInstitut de Biochimie et Génétique Cellulaires, UMR 5095 CNRS - Université de Bordeaux, Bordeaux, France.
Julien JaegyInstitut de Biochimie et Génétique Cellulaires, UMR 5095 CNRS - Université de Bordeaux, Bordeaux, France.
Dácil Alonso GilInstitut de Biochimie et Génétique Cellulaires, UMR 5095 CNRS - Université de Bordeaux, Bordeaux, France.
Stéphanie VazquezInstitut de Biochimie et Génétique Cellulaires, UMR 5095 CNRS - Université de Bordeaux, Bordeaux, France.
Karl EkwallDepartment of Biosciences and Nutrition, Karolinska Institutet, Huddinge, Sweden.
Jean-Paul JaverzatInstitut de Biochimie et Génétique Cellulaires, UMR 5095 CNRS - Université de Bordeaux, Bordeaux, France.ORCID 0000-0002-9671-6753
Institut de Biochimie et Génétique Cellulaires · FRUniversité de Bordeaux · FRCentre National de la Recherche Scientifique · FRKarolinska Institutet · SE

Funding

Agence Nationale de la Recherche ANR-10-IDEX-03-02Agence Nationale de la Recherche ANR-14-CE10-0020-01Fondation ARC pour la Recherche sur le Cancer DOC20160603884Fondation ARC pour la Recherche sur le Cancer PJA 2013 1200 205Fondation ARC pour la Recherche sur le Cancer PJA 20171206211
6 · The paper itself

Abstract

Cohesin has essential roles in chromosome structure, segregation and repair. Cohesin binding to chromosomes is catalyzed by the cohesin loader, Mis4 in fission yeast. How cells fine tune cohesin deposition is largely unknown. Here, we provide evidence that Mis4 activity is regulated by phosphorylation of its cohesin substrate. A genetic screen for negative regulators of Mis4 yielded a CDK called Pef1, whose closest human homologue is CDK5. Inhibition of Pef1 kinase activity rescued cohesin loader deficiencies. In an otherwise wild-type background, Pef1 ablation stimulated cohesin binding to its regular sites along chromosomes while ablating Protein Phosphatase 4 had the opposite effect. Pef1 and PP4 control the phosphorylation state of the cohesin kleisin Rad21. The CDK phosphorylates Rad21 on Threonine 262. Pef1 ablation, non-phosphorylatable Rad21-T262 or mutations within a Rad21 binding domain of Mis4 alleviated the effect of PP4 deficiency. Such a CDK/PP4-based regulation of cohesin loader activity could provide an efficient mechanism for translating cellular cues into a fast and accurate cohesin response.

Indexed as

Cell Cycle ProteinsChromosomal Proteins, Non-HistoneChromosomes, FungalCohesinsCyclin-Dependent KinasesPhosphoprotein PhosphatasesProtein BindingSaccharomyces cerevisiae ProteinsSchizosaccharomycesCell Cycle ProteinsChromosomal Proteins, Non-HistoneCohesinsCyclin-Dependent KinasesPHO85 protein, S cerevisiaePhosphoprotein Phosphatasesprotein phosphatase 4Saccharomyces cerevisiae ProteinsCDKchromosomescohesincohesiongene expressionloop extrusionPhosphataseS. pombe

Identifiers

PMID31895039
PMCPMC6954021
OpenAlexW2997896393

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.