Evidence map›Paper›PMID 31894238›Full record

ArticleSleep2020

Developing preliminary blood metabolomics-based biomarkers of insufficient sleep in humans.

Christopher M Depner, Dasha T Cogswell, Paul J Bisesi, Rachel R Markwald, Charmion Cruickshank-Quinn, Kevin Quinn, Edward L Melanson, Nichole Reisdorph, Kenneth P Wright

Open access · bronzeAbstract read
In one paragraph

Article in Sleep, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
3.4field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 39 citations in OpenAlex.

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  9. Sphingolipids in Emotional Well-Being.Journal of neurochemistry · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Christopher M DepnerSleep and Chronobiology Laboratory, Department of Integrative Physiology, University of Colorado Boulder, Boulder, CO.
Dasha T CogswellSleep and Chronobiology Laboratory, Department of Integrative Physiology, University of Colorado Boulder, Boulder, CO.
Paul J BisesiSleep and Chronobiology Laboratory, Department of Integrative Physiology, University of Colorado Boulder, Boulder, CO.
Rachel R MarkwaldSleep and Chronobiology Laboratory, Department of Integrative Physiology, University of Colorado Boulder, Boulder, CO.
Charmion Cruickshank-QuinnSkaggs School of Pharmacology, University of Colorado Anschutz Medical Campus, Aurora, CO.
Kevin QuinnSkaggs School of Pharmacology, University of Colorado Anschutz Medical Campus, Aurora, CO.
Edward L MelansonDivision of Endocrinology, Metabolism, and Diabetes, University of Colorado Anschutz Medical Campus, Aurora, CO.
Nichole ReisdorphSkaggs School of Pharmacology, University of Colorado Anschutz Medical Campus, Aurora, CO.
Kenneth P WrightSleep and Chronobiology Laboratory, Department of Integrative Physiology, University of Colorado Boulder, Boulder, CO.
University of Colorado Boulder · USUniversity of Colorado Anschutz Medical Campus · USGeriatric Research Education and Clinical Center · US

Funding

PILOT STUDY--SUBSTRATE METABOLISM IN EXTREMELY LOW BIRTH WEIGHT INFANTSP30DK048520 · NIDDK · UNIVERSITY OF COLORADO DENVER · PI Edward L Melanson · 1995 to 2026
$32.6M
Biomarkers and Altered Metabolic Pathways during Sleep Loss and Circadian DisruptionK01HL145099 · NHLBI · UNIVERSITY OF UTAH · PI DEPNER, CHRISTOPHER MICHAEL · 2019 to 2023
$888k
Howard Hughes Medical InstituteNHLBI NIH HHS K01 HL145099NIDDK NIH HHS P30 DK048520
6 · The paper itself

Abstract

STUDY

objectiveIdentify small molecule biomarkers of insufficient sleep using untargeted plasma metabolomics in humans undergoing experimental insufficient sleep.

methodsWe conducted a crossover laboratory study where 16 normal-weight participants (eight men; age 22 ± 5 years; body mass index < 25 kg/m2) completed three baseline days (9 hours sleep opportunity per night) followed by 5-day insufficient (5 hours sleep opportunity per night) and adequate (9 hours sleep opportunity per night) sleep conditions. Energy balanced diets were provided during baseline, with ad libitum energy intake provided during the insufficient and adequate sleep conditions. Untargeted plasma metabolomics analyses were performed using blood samples collected every 4 hours across the final 24 hours of each condition. Biomarker models were developed using logistic regression and linear support vector machine (SVM) algorithms.

resultsThe top-performing biomarker model was developed by linear SVM modeling, consisted of 65 compounds, and discriminated insufficient versus adequate sleep with 74% overall accuracy and a Matthew's Correlation Coefficient of 0.39. The compounds in the top-performing biomarker model were associated with ATP Binding Cassette Transporters in Lipid Homeostasis, Phospholipid Metabolic Process, Plasma Lipoprotein Remodeling, and sphingolipid metabolism.

conclusionWe identified potential metabolomics-based biomarkers of insufficient sleep in humans. Although our current biomarkers require further development and validation using independent cohorts, they have potential to advance our understanding of the negative consequences of insufficient sleep, improve diagnosis of poor sleep health, and could eventually help identify targets for countermeasures designed to mitigate the negative health consequences of insufficient sleep.

Indexed as

MetabolomicsSleep DeprivationAdolescentAdultBiomarkersEnergy IntakeHumansMaleSleepYoung AdultBiomarkersbiomarkerlipid metabolismmetabolomicspersonalized medicinesex differencessleep deprivationsleep losssleep restriction

Identifiers

PMID31894238
PMCPMC7355401
OpenAlexW2998321017

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.