Evidence map›Paper›PMID 31892946›Full record

ReviewEvolutionary applications2020

Genomic biosurveillance of forest invasive alien enemies: A story written in code.

Richard C Hamelin, Amanda D Roe

Open access · goldAbstract readReview
In one paragraph

Review in Evolutionary applications, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
14.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 126 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. De Novo Hybrid Assembly Unveils Multi-Chromosomal Mitochondrial Genomes inInternational journal of molecular sciences · 2024
    Article
  7. Variations in Genetic Diversity of Invasive SpeciesAnimals : an open access journal from MDPI · 2024
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. DNA-Barcoding Identification of Plant Pathogens for Disease Diagnostics.Methods in molecular biology (Clifton, N.J.) · 2023
    Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Chromosome-level assembly of theFrontiers in microbiology · 2022
    Article
  19. Invasive Alien Plant Pathogens: The Need of New Detection Methods.Methods in molecular biology (Clifton, N.J.) · 2022
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 1 country.

Richard C HamelinDepartment of Forest and Conservation Sciences The University of British Columbia Vancouver BC Canada.ORCID https://orcid.org/0000-0003-4006-532X
Amanda D RoeGreat Lakes Forestry Center Natural Resources Canada Sault Ste. Marie ON Canada.ORCID https://orcid.org/0000-0002-1953-6062
Natural Resources Canada · CAUniversity of British Columbia · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The world's forests face unprecedented threats from invasive insects and pathogens that can cause large irreversible damage to the ecosystems. This threatens the world's capacity to provide long-term fiber supply and ecosystem services that range from carbon storage, nutrient cycling, and water and air purification, to soil preservation and maintenance of wildlife habitat. Reducing the threat of forest invasive alien species requires vigilant biosurveillance, the process of gathering, integrating, interpreting, and communicating essential information about pest and pathogen threats to achieve early detection and warning and to enable better decision-making. This process is challenging due to the diversity of invasive pests and pathogens that need to be identified, the diverse pathways of introduction, and the difficulty in assessing the risk of establishment. Genomics can provide powerful new solutions to biosurveillance. The process of invasion is a story written in four chapters: transport, introduction, establishment, and spread. The series of processes that lead to a successful invasion can leave behind a DNA signature that tells the story of an invasion. This signature can help us understand the dynamic, multistep process of invasion and inform management of current and future introductions. This review describes current and future application of genomic tools and pipelines that will provide accurate identification of pests and pathogens, assign outbreak or survey samples to putative sources to identify pathways of spread, and assess risk based on traits that impact the outbreak outcome.

Indexed as

forest healthforest managementforestrygenomicshost–parasite interactionsinvasive speciesmolecular evolutionpopulation genetics‐empirical

Identifiers

PMID31892946
PMCPMC6935587
OpenAlexW2967526966

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.