ArticleScientific reports2019
Characterization of the complete chloroplast genome sequence of Dalbergia species and its phylogenetic implications.
Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.
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Who cites it
34 citing papers in PubMed.
- Article
- Article
- Comparative and phylogenetic analyses of Stipa L. (Poaceae) species based on the complete chloroplast genome sequences.BMC plant biology · 2025Article
- Functional Genomics: From Soybean to Legume.International journal of molecular sciences · 2025Review
- Concentric-object and equiangular-object methods to perform standardized regional analysis in renal mpMRI.Magma (New York, N.Y.) · 2025Article
- RNA Metabolism and the Role of Small RNAs in Regulating Multiple Aspects of RNA Metabolism.Non-coding RNA · 2024Review
- Characterization and phylogenetic analysis of the chloroplast genome ofMitochondrial DNA. Part B, Resources · 2024Article
- The DNA barcode identification of Dalbergia odorifera T. Chen and Dalbergia tonkinensis Prain.BMC plant biology · 2023Article
- Andrographolide protects acute ultraviolet-B radiation-induced photodamages in the mouse skin.Archives of dermatological research · 2023Article
- Phylogeny ofPlant diversity · 2023Article
- Phylogeny ofFrontiers in plant science · 2023Article
- Phylogenomics and plastome evolution ofFrontiers in plant science · 2023Article
- Genetic characterization of a group of commercial African timber species: From genomics to barcoding.PloS one · 2023Article
- Chloroplast genome skimming of a potential agroforestry species3 Biotech · 2023Article
- Chromosome-level genome assembly and population genetic analysis of a near-threatened rosewood species (Frontiers in plant science · 2023Article
- Comprehensive Comparative Analysis and Development of Molecular Markers forInternational journal of molecular sciences · 2022Article
- Emerging targets signaling for inflammation in Parkinson's disease drug discovery.Metabolic brain disease · 2022Review
- Comparative Analyses of Complete Chloroplast Genomes and Karyotypes of AllotetraploidInternational journal of molecular sciences · 2022Article
- Phosphate Mobilization by Culturable Fungi and Their Capacity to Increase Soil P Availability and Promote Barley Growth.Current microbiology · 2022Article
- Comparative analysis of two Korean irises (Iris ruthenica and I. uniflora, Iridaceae) based on plastome sequencing and micromorphology.Scientific reports · 2022Article
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5 authors.
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No grant is acknowledged in the PubMed record.
Abstract
The pantropical plant genus Dalbergia comprises approximately 250 species, most of which have a high economic and ecological value. However, these species are among the most threatened due to illegal logging and the timber trade. To enforce protective legislation and ensure effective conservation of Dalbergia species, the identity of wood being traded must be accurately validated. For the rapid and accurate identification of Dalbergia species and assessment of phylogenetic relationships, it would be highly desirable to develop more effective DNA barcodes for these species. In this study, we sequenced and compared the chloroplast genomes of nine species of Dalbergia. We found that these chloroplast genomes were conserved with respect to genome size, structure, and gene content and showed low sequence divergence. We identified eight mutation hotspots, namely, six intergenic spacer regions (trnL-trnT, atpA-trnG, rps16-accD, petG-psaJ, ndhF-trnL, and ndhG-ndhI) and two coding regions (ycf1a and ycf1b), as candidate DNA barcodes for Dalbergia. Phylogenetic analyses based on whole chloroplast genome data provided the best resolution of Dalbergia, and phylogenetic analysis of the Fabaceae showed that Dalbergia was sister to Arachis. Based on comparison of chloroplast genomes, we identified a set of highly variable markers that can be developed as specific DNA barcodes.
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