Evidence map›Paper›PMID 31890903›Full record

ArticleBiochemistry and biophysics reports2020

Isothermal titration calorimetry and surface plasmon resonance analysis using the dynamic approach.

Ganesh Kumar Krishnamoorthy, Prashanth Alluvada, Shahul Hameed Mohammed Sherieff, Timothy Kwa, Janarthanan Krishnamoorthy

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Biochemistry and biophysics reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 3 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed, 1 pooled it
1.8field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 1 synthesis or guideline pooled it, 15 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Ganesh Kumar KrishnamoorthyCurtiss-Wright Avionics and Electronics, Dublin 14, Ireland.
Prashanth AlluvadaDepartment of Mechanical Engineering, Jimma Institute of Technology, Jimma University, Ethiopia.
Shahul Hameed Mohammed SherieffWise Corner Pvt Ltd, Chennai, Tamilnadu, India.
Timothy KwaDepartment of Bio-medical Engineering, Jimma Institute of Technology, Jimma University, Ethiopia.
Janarthanan Krishnamoorthy#15-336, Blk 385, Bukit Batok West Ave 5, 650385, Singapore.
Jimma University · ET

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Biophysical techniques such as isothermal titration calorimetry (ITC) and surface plasmon resonance (SPR) are routinely used to ascertain the global binding mechanisms of protein-protein or protein-ligand interaction. Recently, Dumas etal, have explicitly modelled the instrument response of the ligand dilution and analysed the ITC thermogram to obtain kinetic rate constants. Adopting a similar approach, we have integrated the dynamic instrument response with the binding mechanism to simulate the ITC profiles of equivalent and independent binding sites, equivalent and sequential binding sites and aggregating systems. The results were benchmarked against the standard commercial software Origin-ITC. Further, the experimental ITC chromatograms of 2'-CMP + RNASE and BH3I-1 + hBCL

Indexed as

Aggregation modelBH3I-1Dynamic approachEquivalent bindinghBCLXLInstrument responseITCRNASESequential bindingSPR

Identifiers

PMID31890903
PMCPMC6926116
OpenAlexW2996680846

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.