Evidence map›Paper›PMID 31889737›Full record

ArticlePhysica D. Nonlinear phenomena2019

Moran Model of Spatial Alignment in Microbial Colonies.

B R Karamched, W Ott, I Timofeyev, R N Alnahhas, M R Bennett, K Josić

Abstract read
In one paragraph

Article in Physica D. Nonlinear phenomena, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Signaling in microbial communities with open boundaries.bioRxiv : the preprint server for biology · 2023
    Article
  5. Article
  6. Population genetics in microchannels.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

B R KaramchedDepartment of Mathematics, University of Houston, Houston, Texas 77004, USA.
W OttDepartment of Mathematics, University of Houston, Houston, Texas 77004, USA.
I TimofeyevDepartment of Mathematics, University of Houston, Houston, Texas 77004, USA.
R N AlnahhasDepartment of Biosciences, Rice University, Houston, Texas 77005, USA.
M R BennettDepartment of Biosciences, Rice University, Houston, Texas 77005, USA.
K JosićDepartment of Mathematics, University of Houston, Houston, Texas 77004, USA.

Funding

Expanding the utility of transcriptional bacterial computingR01GM117138 · NIGMS · RICE UNIVERSITY · PI BENNETT, MATTHEW R., JOSIC, KRESIMIR · 2016 to 2019
$2.0M
NIGMS NIH HHS R01 GM117138
6 · The paper itself

Abstract

We describe a spatial Moran model that captures mechanical interactions and directional growth in spatially extended populations. The model is analytically tractable and completely solvable under a mean-field approximation and can elucidate the mechanisms that drive the formation of population-level patterns. As an example we model a population of

Indexed as

cell alignmentmean fieldMoran modelphase transition

Identifiers

PMID31889737
PMCPMC6936756

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.