Evidence map›Paper›PMID 31888621›Full record

ArticleBMC medical genomics2019

A network clustering based feature selection strategy for classifying autism spectrum disorder.

Lingkai Tang, Sakib Mostafa, Bo Liao, Fang-Xiang Wu

Abstract read
In one paragraph

Article in BMC medical genomics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Lingkai TangDepartment of Mechanical Engineering, University of Saskatchewan, Saskatoon, S7N 5A9, Canada.
Sakib MostafaDivision of Biomedical Engineering, University of Saskatchewan, Saskatoon, S7N 5A9, Canada.
Bo LiaoSchool of Mathematics and Statistics, Hainan Normal University, Haikou, 571158, China.
Fang-Xiang WuDepartment of Mechanical Engineering, University of Saskatchewan, Saskatoon, S7N 5A9, Canada. faw341@mail.usask.ca.ORCID 0000-0002-4593-9332

Funding

Natural Sciences and Engineering Research Council of Canada RGPIN-2016-05214
6 · The paper itself

Abstract

backgroundAdvanced non-invasive neuroimaging techniques offer new approaches to study functions and structures of human brains. Whole-brain functional networks obtained from resting state functional magnetic resonance imaging has been widely used to study brain diseases like autism spectrum disorder (ASD). Auto-classification of ASD has become an important issue. Existing classification methods for ASD are based on features extracted from the whole-brain functional networks, which may be not discriminant enough for good performance.

methodsIn this study, we propose a network clustering based feature selection strategy for classifying ASD. In our proposed method, we first apply symmetric non-negative matrix factorization to divide brain networks into four modules. Then we extract features from one of four modules called default mode network (DMN) and use them to train several classifiers for ASD classification.

resultsThe computational experiments show that our proposed method achieves better performances than those trained with features extracted from the whole brain network.

conclusionIt is a good strategy to train the classifiers for ASD based on features from the default mode subnetwork.

Indexed as

AlgorithmsArea Under CurveAutism Spectrum DisorderBrainHumansNerve NetROC CurveAutism spectrum disorderBrain networksClassificationFeature selectionNetwork clusteringNon-negative matrix factorization

Identifiers

PMID31888621
PMCPMC6936069

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.