Evidence map›Paper›PMID 31888506›Full record

ArticleBMC plant biology2019

Metabolite profiling during graft union formation reveals the reprogramming of primary metabolism and the induction of stilbene synthesis at the graft interface in grapevine.

Duyên Prodhomme, Josep Valls Fonayet, Cyril Hévin, Céline Franc, Ghislaine Hilbert, Gilles de Revel, Tristan Richard, Nathalie Ollat, Sarah Jane Cookson

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
6.1field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 39 citations in OpenAlex.

  1. Review
  2. Article
  3. A Statistical Mechanics Model to Decode Tissue Crosstalk During Graft Formation.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Article
  4. Article
  5. Review
  6. Wood Degradation byJournal of fungi (Basel, Switzerland) · 2023
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Assessment of Antioxidants in Selected Plant Rootstocks.Antioxidants (Basel, Switzerland) · 2020
    Article
  17. Review
  18. Review
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Duyên ProdhommeINRA, Univ. Bordeaux, ISVV, EGFV UMR 1287, F-33140, Villenave d'Ornon, France.
Josep Valls FonayetUnité de recherche Oenologie, EA 4577, USC 1366 INRA, ISVV, Université de Bordeaux, F33882, Villenave d'Ornon, France.
Cyril HévinINRA, Univ. Bordeaux, ISVV, EGFV UMR 1287, F-33140, Villenave d'Ornon, France.
Céline FrancUnité de recherche Oenologie, EA 4577, USC 1366 INRA, ISVV, Université de Bordeaux, F33882, Villenave d'Ornon, France.
Ghislaine HilbertINRA, Univ. Bordeaux, ISVV, EGFV UMR 1287, F-33140, Villenave d'Ornon, France.
Gilles de RevelUnité de recherche Oenologie, EA 4577, USC 1366 INRA, ISVV, Université de Bordeaux, F33882, Villenave d'Ornon, France.
Tristan RichardUnité de recherche Oenologie, EA 4577, USC 1366 INRA, ISVV, Université de Bordeaux, F33882, Villenave d'Ornon, France.
Nathalie OllatINRA, Univ. Bordeaux, ISVV, EGFV UMR 1287, F-33140, Villenave d'Ornon, France.
Sarah Jane CooksonINRA, Univ. Bordeaux, ISVV, EGFV UMR 1287, F-33140, Villenave d'Ornon, France. sarah.cookson@inra.fr.ORCID http://orcid.org/0000-0003-2591-192X
Université de Bordeaux · FR

Funding

Agence Nationale de la Recherche ANR-10-LABX-45FranceAgriMer 22001149/00001505
6 · The paper itself

Abstract

backgroundGrafting with rootstocks is essential for the culture of many perennial fruit crops and is increasing being used in the production of annual fruits and vegetables. Our previous work based on microarrays showed that transcripts encoding enzymes of both primary and secondary metabolism were differentially expressed during graft union formation in both homo-grafts (a genotype grafted with itself) and hetero-grafts (two different genotypes grafted together). The aim of this study was to profile primary and secondary metabolites, and quantify the activity of phenylalanine ammonia lyase (PAL) and neutral invertase (NI) in the scion and rootstock tissues and the graft interface of homo and hetero-grafts of grapevine 1 month after grafting. Table-top grafting was done on over-wintering stems (canes) of grapevine and the graft interface tissues (containing some woody stem tissues and callus) were compared to the surrounding rootstock and scion tissues. The objective was to identify compounds involved in graft union formation and hetero-grafting responses.

resultsA total of 54 compounds from primary and secondary metabolism (19 amino acids, five primary and 30 secondary compounds metabolites) and the activity of two enzymes were measured. The graft interface was associated with an increase in the accumulation of the branched-chain amino acids, basic amino acids, certain stilbene compounds and higher PAL and NI activity in comparison to the surrounding woody stem tissues. Some amino acids and stilbenes were identified as being accumulated differently between the graft interfaces of the scion/rootstock combinations in a manner which was unrelated to their concentrations in the surrounding woody stem tissues.

conclusionsThis study revealed the modification of primary metabolism to support callus cell formation and the stimulation of stilbene synthesis at the graft interface, and how these processes are modified by hetero-grafting. Knowledge of the metabolites and/or enzymes required for successful graft union formation offer us the potential to identify markers that could be used by nurseries and researchers for selection and breeding purposes.

Indexed as

Gene Expression Regulation, Plantbeta-FructofuranosidasePhenylalanine Ammonia-LyasePlant ProteinsPlant RootsStilbenesVitisbeta-FructofuranosidasePhenylalanine Ammonia-LyasePlant ProteinsStilbenesAmino acidsCanesFlavanolsGraftingGrapevineRootstockScionStilbenesSugarsWood

Identifiers

PMID31888506
PMCPMC6937855
OpenAlexW2998467782

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.