Evidence map›Paper›PMID 31888479›Full record

ArticleBMC plant biology2019

Nitric oxide- induced AtAO3 differentially regulates plant defense and drought tolerance in Arabidopsis thaliana.

Murtaza Khan, Qari Muhammad Imran, Muhammad Shahid, Bong-Gyu Mun, Sang-Uk Lee, Muhammad Aaqil Khan, Adil Hussain, In-Jung Lee, Byung-Wook Yun

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
7.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 70 citations in OpenAlex.

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  16. Synergistic Effect of Melatonin andInternational journal of molecular sciences · 2023
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  18. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Murtaza Khan
Qari Muhammad Imran
Muhammad Shahid
Bong-Gyu MunLaboratory of Plant Functional Genomics Department of Plant Biosciences, Kyungpook National University, Daegu, Republic of Korea.
Sang-Uk LeeLaboratory of Plant Functional Genomics Department of Plant Biosciences, Kyungpook National University, Daegu, Republic of Korea.
Muhammad Aaqil KhanLaboratory of Plant Physiology, Department of Plant Biosciences, Kyungpook National University, Daegu, Republic of Korea.
Adil HussainDepartment of Agriculture, Abdul Wali Khan University, KPK, Mardan, Pakistan.
In-Jung LeeLaboratory of Plant Physiology, Department of Plant Biosciences, Kyungpook National University, Daegu, Republic of Korea.
Byung-Wook YunLaboratory of Plant Functional Genomics Department of Plant Biosciences, Kyungpook National University, Daegu, Republic of Korea. bwyun@knu.ac.kr.ORCID http://orcid.org/0000-0002-5451-2365
Kyungpook National University · KRAbdul Wali Khan University Mardan · PK

Funding

rural development administration Republic of Korea SSAC, Grant No., PJ01342501
6 · The paper itself

Abstract

backgroundExposure of plants to different environmental insults instigates significant changes in the cellular redox tone driven in part by promoting the production of reactive nitrogen species. The key player, nitric oxide (NO) is a small gaseous diatomic molecule, well-known for its signaling role during stress. In this study, we focused on abscisic acid (ABA) metabolism-related genes that showed differential expression in response to the NO donor S-nitroso-L-cysteine (CySNO) by conducting RNA-seq-based transcriptomic analysis.

resultsCySNO-induced ABA-related genes were identified and further characterized. Gene ontology terms for biological processes showed most of the genes were associated with protein phosphorylation. Promoter analysis suggested that several cis-regulatory elements were activated under biotic and/or abiotic stress conditions. The ABA biosynthetic gene AtAO3 was selected for validation using functional genomics. The loss of function mutant atao3 was found to differentially regulate oxidative and nitrosative stress. Further investigations for determining the role of AtAO3 in plant defense suggested a negative regulation of plant basal defense and R-gene-mediated resistance. The atao3 plants showed resistance to virulent Pseudomonas syringae pv. tomato strain DC3000 (Pst DC3000) with gradual increase in PR1 gene expression. Similarly, atao3 plants showed increased hypersensitive response (HR) when challenged with Pst DC3000 (avrB). The atgsnor1-3 and atsid2 mutants showed a susceptible phenotype with reduced PR1 transcript accumulation. Drought tolerance assay indicated that atao3 and atnced3 ABA-deficient mutants showed early wilting, followed by plant death. The study of stomatal structure showed that atao3 and atnced3 were unable to close stomata even at 7 days after drought stress. Further, they showed reduced ABA content and increased electrolyte leakage than the wild-type (WT) plants. The quantitative polymerase chain reaction analysis suggested that ABA biosynthesis genes were down-regulated, whereas expression of most of the drought-related genes were up-regulated in atao3 than in WT.

conclusionsAtAO3 negatively regulates pathogen-induced salicylic acid pathway, although it is required for drought tolerance, despite the fact that ABA production is not totally dependent on AtAO3, and that drought-related genes like DREB2 and ABI2 show response to drought irrespective of ABA content.

Indexed as

Gene Expression Regulation, PlantAbscisic AcidAldehyde OxidaseArabidopsisArabidopsis ProteinsCysteineNitric OxideSignal TransductionS-NitrosothiolsAAO3 protein, ArabidopsisAbscisic AcidAldehyde OxidaseArabidopsis ProteinsCysteineNitric OxideS-nitrosocysteineS-NitrosothiolsABA metabolism genesBasal defenseDrought stressNitrosative stressR-gene-mediated resistanceRNA-seq analysisStomatal regulation

Identifiers

PMID31888479
PMCPMC6937950
OpenAlexW2998213743

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.