ArticleBMC genomics2019
Genomic identification and characterization of MYC family genes in wheat (Triticum aestivum L.).
Article in BMC genomics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.
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16 citing papers in PubMed, 45 citations in OpenAlex.
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- Functional analysis of a wheat class III peroxidase gene, TaPer12-3A, in seed dormancy and germination.BMC plant biology · 2024Article
- Genome-Wide Identification ofPlants (Basel, Switzerland) · 2024Article
- Genome-wide identification of the walnut MYC gene family and functional characterization of Xinjiang wild walnut under low-temperature stress.Frontiers in genetics · 2024Article
- Genetic Mapping of Flavonoid Grain Pigments in Durum Wheat.Plants (Basel, Switzerland) · 2023Article
- Genome-Wide Identification and Analysis Uncovers the Potential Role of JAZ and MYC Families in Potato under Abiotic Stress.International journal of molecular sciences · 2023Article
- Potential role of the regulatoryFrontiers in plant science · 2023Article
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- Genome Wide Identification and Characterization of WheatInternational journal of molecular sciences · 2022Article
- TcMYC2 regulates Pyrethrin biosynthesis inHorticulture research · 2022Article
- Phylogenomic analysis of phenylalanine ammonia-lyase (PAL) multigene family and their differential expression analysis in wheat (Frontiers in plant science · 2022Article
- Survey of Drought-Associated TAWRKY2-D1 Gene Diversity in Bread Wheat and Wheat Relatives.Molecular biotechnology · 2021Article
- Identification of a major and stable QTL on chromosome 5A confers spike length in wheat (Molecular breeding : new strategies in plant improvement · 2021Article
- JA signal-mediated immunity of Dendrobium catenatum to necrotrophic Southern Blight pathogen.BMC plant biology · 2021Article
- Genome-Wide Identification of WheatFrontiers in plant science · 2021Article
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Authors and funding
11 authors at 4 institutions in 2 countries.
Funding
Abstract
backgroundMYC transcriptional factors are members of the bHLH (basic helix-loop-helix) superfamily, and play important roles in plant growth and development. Recent studies have revealed that some MYCs are involved in the crosstalk between Jasmonic acid regulatory pathway and light signaling in Arabidopsis, but such kinds of studies are rare in wheat, especially in photo-thermo-sensitive genic male sterile (PTGMS) wheat line.
results27 non-redundant MYC gene copies, which belonged to 11 TaMYC genes, were identified in the whole genome of wheat (Chinese Spring). These gene copies were distributed on 13 different chromosomes, respectively. Based on the results of phylogenetic analysis, 27 TaMYC gene copies were clustered into group I, group III, and group IV. The identified TaMYC genes copies contained different numbers of light, stress, and hormone-responsive regulatory elements in their 1500 base pair promoter regions. Besides, we found that TaMYC3 was expressed highly in stem, TaMYC5 and TaMYC9 were expressed specially in glume, and the rest of TaMYC genes were expressed in all tissues (root, stem, leaf, pistil, stamen, and glume) of the PTGMS line BS366. Moreover, we found that TaMYC3, TaMYC7, TaMYC9, and TaMYC10 were highly sensitive to methyl jasmonate (MeJA), and other TaMYC genes responded at different levels. Furthermore, we confirmed the expression profiles of TaMYC family members under different light quality and plant hormone stimuli, and abiotic stresses. Finally, we predicted the wheat microRNAs that could interact with TaMYC family members, and built up a network to show their integrative relationships.
conclusionsThis study analyzed the size and composition of the MYC gene family in wheat, and investigated stress-responsive and light quality induced expression profiles of each TaMYC gene in the PTGMS wheat line BS366. In conclusion, we obtained lots of important information of TaMYC family, and the results of this study was supposed to contribute novel insights and gene and microRNA resources for wheat breeding, especially for the improvement of PTGMS wheat lines.
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