Evidence map›Paper›PMID 31886261›Full record

ArticleBioMed research international2019

Integration of Gene Expression Profile Data of Human Epicardial Adipose Tissue from Coronary Artery Disease to Verification of Hub Genes and Pathways.

Weitie Wang, Qing Liu, Yong Wang, Hulin Piao, Bo Li, Zhicheng Zhu, Dan Li, Tiance Wang, Rihao Xu, Kexiang Liu

Open access · hybridAbstract read
In one paragraph

Article in BioMed research international, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.6field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. The association betweenFrontiers in cardiovascular medicine · 2022
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  6. Review
  7. Omentin-1 Modulates Macrophage FunctionFrontiers in cardiovascular medicine · 2021
    Article
  8. Evaluation of Exosomal miRNA in Blood as a Potential Diagnostic Biomarker for Human Non-Small Cell Lung Cancer.Medical science monitor : international medical journal of experimental and clinical research · 2020
    Article
  9. Multiple Bioinformatics Analyses of Integrated Gene Expression Profiling Data and Verification of Hub Genes Associated with Diabetic Retinopathy.Medical science monitor : international medical journal of experimental and clinical research · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 2 countries.

Weitie WangDepartment of Cardiovascular Surgery of the Second Hospital of Jilin University, Ziqiang Street 218, Changchun, Jilin 130041, China.ORCID https://orcid.org/0000-0002-3981-9668
Qing LiuGraduate School of Medicine and Faculty of Medicine of the University of Tokyo, 7-3-1 Hongo Bunkyo-ku Tokyo, Tokyo 113-8655, Japan.
Yong WangDepartment of Cardiovascular Surgery of the Second Hospital of Jilin University, Ziqiang Street 218, Changchun, Jilin 130041, China.
Hulin PiaoDepartment of Cardiovascular Surgery of the Second Hospital of Jilin University, Ziqiang Street 218, Changchun, Jilin 130041, China.
Bo LiDepartment of Cardiovascular Surgery of the Second Hospital of Jilin University, Ziqiang Street 218, Changchun, Jilin 130041, China.
Zhicheng ZhuDepartment of Cardiovascular Surgery of the Second Hospital of Jilin University, Ziqiang Street 218, Changchun, Jilin 130041, China.
Dan LiDepartment of Cardiovascular Surgery of the Second Hospital of Jilin University, Ziqiang Street 218, Changchun, Jilin 130041, China.
Tiance WangDepartment of Cardiovascular Surgery of the Second Hospital of Jilin University, Ziqiang Street 218, Changchun, Jilin 130041, China.
Rihao XuDepartment of Cardiovascular Surgery of the Second Hospital of Jilin University, Ziqiang Street 218, Changchun, Jilin 130041, China.
Kexiang LiuDepartment of Cardiovascular Surgery of the Second Hospital of Jilin University, Ziqiang Street 218, Changchun, Jilin 130041, China.ORCID https://orcid.org/0000-0002-9350-4499
Jilin University · CNThe University of Tokyo · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThis study aim to identify the core pathogenic genes and explore the potential molecular mechanisms of human coronary artery disease (CAD). METHODOLOGY: Two gene profiles of epicardial adipose tissue from CAD patients including GSE 18612 and GSE 64554 were downloaded and integrated by

resultsThe top 10 hub genes calculated by the degree method were AKT1, MYC, EGFR, ACTB, CDC42, IGF1, FGF2, CXCR4, MMP2 and LYN, which relevant with the focal adhesion pathway. Module analysis revealed that the focal adhesion was also acted an important role in CAD, which was consistence with cytoHubba. All the top 10 hub genes were verified by qRT-PCR which presented that AKT1, EGFR, CDC42, FGF2, and MMP2 were significantly decreased in epicardial adipose tissue of CAD samples (

conclusionsThese candidate genes could be used as potential diagnostic biomarkers and therapeutic targets of CAD.

Indexed as

Gene Expression ProfilingGene Regulatory NetworksAdipose TissueCase-Control StudiesCoronary Artery DiseaseGene OntologyHumansPericardiumProtein Interaction MapsRNA, MessengerSignal TransductionRNA, Messenger

Identifiers

PMID31886261
PMCPMC6900948
OpenAlexW2990773142

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.