Evidence map›Paper›PMID 31883312›Full record

ArticleAnatomical record (Hoboken, N.J. : 2007)2020

Transcriptomic Analyses of Inner Ear Sensory Epithelia in Zebrafish.

Qi Yao, Lingyu Wang, Rahul Mittal, Denise Yan, Michael T Richmond, Steven Denyer, Teresa Requena, Kaili Liu, Gaurav K Varshney, Zhongmin Lu and 1 more

Open access · greenAbstract read
In one paragraph

Article in Anatomical record (Hoboken, N.J. : 2007), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.9field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. The Genomics of Auditory Function and Disease.Annual review of genomics and human genetics · 2022
    Review
  5. Single-Cell Sequencing Applications in the Inner Ear.Frontiers in cell and developmental biology · 2021
    Review
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

Qi YaoDepartment of Otolaryngology, Miller School of Medicine, University of Miami, Miami, Florida.
Lingyu WangDepartment of Biology, University of Miami, Miami, Florida.
Rahul MittalDepartment of Otolaryngology, Miller School of Medicine, University of Miami, Miami, Florida.ORCID 0000-0003-0894-237X
Denise YanDepartment of Otolaryngology, Miller School of Medicine, University of Miami, Miami, Florida.
Michael T RichmondDepartment of Biology, University of Miami, Miami, Florida.
Steven DenyerDepartment of Biology, University of Miami, Miami, Florida.
Teresa RequenaGenes & Human Disease Research Program, Oklahoma Medical Research Foundation, Oklahoma City, Oklahoma.
Kaili LiuGenes & Human Disease Research Program, Oklahoma Medical Research Foundation, Oklahoma City, Oklahoma.ORCID 0000-0003-4162-9481
Gaurav K VarshneyGenes & Human Disease Research Program, Oklahoma Medical Research Foundation, Oklahoma City, Oklahoma.
Zhongmin LuDepartment of Biology, University of Miami, Miami, Florida.ORCID 0000-0002-7600-8960
Xue Zhong LiuDepartment of Otolaryngology, Miller School of Medicine, University of Miami, Miami, Florida.
University of Miami · USOklahoma Medical Research Foundation · USCentral South University · CN

Funding

Understanding connective tissue development and disease with PDGFR-driven..... P20GM103636 · NIGMS · OKLAHOMA MEDICAL RESEARCH FOUNDATION · PI THOMPSON, LINDA F · 2013 to 2023
$26.9M
Molecular Genetics on Non Syndromic Hearing Loss (NSHL)R01DC005575 · NIDCD · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI LIU, XUE Z · 2001 to 2024
$10.6M
Sensory disorders in COVID -19 as an early identifier and healthcare worker protectionR01DC012115 · NIDCD · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI LIU, XUE Z · 2013 to 2022
$7.2M
NIDCD NIH HHS R01 DC005575NIDCD NIH HHS R01 DC012115NIGMS NIH HHS P20 GM103636
6 · The paper itself

Abstract

Analysis of gene expression has the potential to assist in the understanding of multiple cellular processes including proliferation, cell-fate specification, senesence, and activity in both healthy and disease states. Zebrafish model has been increasingly used to understand the process of hearing and the development of the vertebrate auditory system. Within the zebrafish inner ear, there are three otolith organs, each containing a sensory macula of hair cells. The saccular macula is primarily involved in hearing, the utricular macula is primarily involved in balance and the function of the lagenar macula is not completely understood. The goal of this study is to understand the transcriptional differences in the sensory macula associated with different otolith organs with the intention of understanding the genetic mechanisms responsible for the distinct role each organ plays in sensory perception. The sensory maculae of the saccule, utricle, and lagena were dissected out of adult Et(krt4:GFP)

Indexed as

TranscriptomeAnimalsEar, InnerHair Cells, AuditoryHearingZebrafishhearingmicroarrayneurosensory epitheliumtranscriptome analysiszebrafish inner ear

Identifiers

PMID31883312
PMCPMC8108486
OpenAlexW2997982454

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.