Evidence map›Paper›PMID 31883085›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2020

Biochemical Characterization of Middle East Respiratory Syndrome Coronavirus Spike Protein Proteolytic Processing.

Gary R Whittaker, Jean K Millet

Open access · greenAbstract read
In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
4.8field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 11 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Trypsin-Like Proteases and Their Role in Muco-Obstructive Lung Diseases.International journal of molecular sciences · 2021
    Review
  5. Review
  6. The role of extracellular vesicles in COVID-19 virus infection.Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases · 2020
    Review
  7. Review
  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 2 countries.

Gary R WhittakerDepartment of Microbiology and Immunology, College of Veterinary Medicine, Cornell University, Ithaca, NY, USA.
Jean K MilletDepartment of Microbiology and Immunology, College of Veterinary Medicine, Cornell University, Ithaca, NY, USA. jean.millet@inra.fr.
Cornell University · USVirologie et Immunologie Moléculaires · FR

Funding

Structural and Functional Analysis of the Coronavirus Spike Protein Fusion PeptideR01AI135270 · NIAID · CORNELL UNIVERSITY · PI DANIEL, SUSAN, WHITTAKER, GARY R · 2018 to 2021
$2.5M
Spike protein cleavage-activation and emergence of coronaviruses with extended trR21AI111085 · NIAID · CORNELL UNIVERSITY · PI WHITTAKER, GARY R · 2014 to 2015
$419k
NIAID NIH HHS R01 AI135270NIAID NIH HHS R21 AI111085
6 · The paper itself

Abstract

The coronavirus spike envelope glycoprotein is an essential viral component that mediates virus entry events. Biochemical assessment of the spike protein is critical for understanding structure-function relationships and the roles of the protein in the viral life cycle. Coronavirus spike proteins are typically proteolytically processed and activated by host cell enzymes such as trypsin-like proteases, cathepsins, or proprotein-convertases. Analysis of coronavirus spike proteins by western blot allows the visualization and assessment of proteolytic processing by endogenous or exogenous proteases. Here, we present a method based on western blot analysis to investigate spike protein proteolytic cleavage by transient transfection of HEK-293 T cells allowing expression of the spike protein of the highly pathogenic Middle East respiratory syndrome coronavirus in the presence or absence of a cellular trypsin-like transmembrane serine protease, matriptase. Such analysis enables the characterization of cleavage patterns produced by a host protease on a coronavirus spike glycoprotein.

Indexed as

Blotting, WesternCell LineCoronavirus InfectionsHumansMiddle East Respiratory Syndrome CoronavirusProtein Processing, Post-TranslationalProteolysisSerine EndopeptidasesSpike Glycoprotein, CoronavirusVirus InternalizationmatriptaseSerine EndopeptidasesSpike Glycoprotein, Coronavirustrypsin-like serine proteaseCoronavirusHost cell proteaseMatriptaseMiddle East respiratory syndrome (MERS)Proteolytic processingSpike proteinTransient transfectionVirus entryWestern blot

Identifiers

PMID31883085
PMCPMC7121948
OpenAlexW2996890300

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.