Evidence map›Paper›PMID 31882444›Full record

ArticleLife science alliance2020

Oscillatory cAMP signaling rapidly alters H3K4 methylation.

Tyler C Huff, Vladimir Camarena, David W Sant, Zachary Wilkes, Derek Van Booven, Allegra T Aron, Ryan K Muir, Adam R Renslo, Christopher J Chang, Paula V Monje and 1 more

Open access · goldAbstract read
In one paragraph

Article in Life science alliance, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.5field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 9 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Epigenomic regulation by labile iron.Free radical biology & medicine · 2021
    Article
  6. Review
  7. Ferrous Iron-Dependent Pharmacology.Trends in pharmacological sciences · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 1 country.

Tyler C HuffJohn P. Hussman Institute for Human Genomics, Dr. John T. Macdonald Foundation Department of Human Genetics, University of Miami Miller School of Medicine, Miami, FL, USA.
Vladimir CamarenaJohn P. Hussman Institute for Human Genomics, Dr. John T. Macdonald Foundation Department of Human Genetics, University of Miami Miller School of Medicine, Miami, FL, USA.ORCID 0000-0001-9466-6863
David W SantJohn P. Hussman Institute for Human Genomics, Dr. John T. Macdonald Foundation Department of Human Genetics, University of Miami Miller School of Medicine, Miami, FL, USA.
Zachary WilkesJohn P. Hussman Institute for Human Genomics, Dr. John T. Macdonald Foundation Department of Human Genetics, University of Miami Miller School of Medicine, Miami, FL, USA.
Derek Van BoovenJohn P. Hussman Institute for Human Genomics, Dr. John T. Macdonald Foundation Department of Human Genetics, University of Miami Miller School of Medicine, Miami, FL, USA.
Allegra T AronDepartment of Molecular and Cell Biology, University of California, Berkeley, CA, USA.
Ryan K MuirDepartment of Pharmaceutical Chemistry, University of California, San Francisco, CA, USA.
Adam R RensloDepartment of Pharmaceutical Chemistry, University of California, San Francisco, CA, USA.ORCID 0000-0002-1240-2846
Christopher J ChangDepartment of Molecular and Cell Biology, University of California, Berkeley, CA, USA.
Paula V MonjeDepartment of Neurological Surgery, Indiana University School of Medicine, Indianapolis, IN, USA.
Gaofeng WangJohn P. Hussman Institute for Human Genomics, Dr. John T. Macdonald Foundation Department of Human Genetics, University of Miami Miller School of Medicine, Miami, FL, USA gwang@med.miami.edu.ORCID 0000-0001-8202-8282
University of Miami · USUniversity of California, San Francisco · USHoward Hughes Medical Institute · USNeurological Surgery · USUniversity of California, Berkeley · US

Funding

RESEARCH TRAINING IN CHEMISTRY AND CHEMICAL BIOLOGYT32GM064337 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI CRAIK, CHARLES SCOTT · 2002 to 2021
$7.8M
Molecular Imaging Probes To Study Redox BiologyR01GM079465 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI Christopher J. Chang · 2006 to 2026
$7.8M
Univ of Calif Berkeley Chemistry-Biology Interface ProgramT32GM066698 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI CHANG, CHRISTOPHER J., FRANCIS, MATTHEW B · 2004 to 2023
$7.5M
Epigenetic Prevention of Diabetic Neuropathy by Vitamin CR01NS089525 · NINDS · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI WANG, GAOFENG · 2014 to 2017
$1.2M
Howard Hughes Medical InstituteNIGMS NIH HHS R01 GM079465NIGMS NIH HHS T32 GM064337NIGMS NIH HHS T32 GM066698NINDS NIH HHS R01 NS089525
6 · The paper itself

Abstract

Epigenetic variation reflects the impact of a dynamic environment on chromatin. However, it remains elusive how environmental factors influence epigenetic events. Here, we show that G protein-coupled receptors (GPCRs) alter H3K4 methylation via oscillatory intracellular cAMP. Activation of Gs-coupled receptors caused a rapid decrease of H3K4me3 by elevating cAMP, whereas stimulation of Gi-coupled receptors increased H3K4me3 by diminishing cAMP. H3K4me3 gradually recovered towards baseline levels after the removal of GPCR ligands, indicating that H3K4me3 oscillates in tandem with GPCR activation. cAMP increased intracellular labile Fe(II), the cofactor for histone demethylases, through a non-canonical cAMP target-Rap guanine nucleotide exchange factor-2 (RapGEF2), which subsequently enhanced endosome acidification and Fe(II) release from the endosome via vacuolar H

Indexed as

AnimalsCells, CulturedCyclic AMPDemethylationFerrous CompoundsGene SilencingHistonesJumonji Domain-Containing Histone DemethylasesLigandsMethylationOxidoreductases, N-DemethylatingProtein Processing, Post-TranslationalRatsReceptors, G-Protein-CoupledSchwann CellsSignal Transduction8-((4-chlorophenyl)thio)cyclic-3',5'-AMPCyclic AMPFerrous Compoundshistone H3 trimethyl Lys4HistonesJumonji Domain-Containing Histone DemethylasesKdm5c protein, ratLigandsOxidoreductases, N-DemethylatingReceptors, G-Protein-CoupledThionucleotides

Identifiers

PMID31882444
PMCPMC6935296
OpenAlexW2998211792

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.