Evidence map›Paper›PMID 31881922›Full record

ArticleParasites & vectors2019

Genetic variation of Echinococcus spp. in yaks and sheep in the Tibet Autonomous Region of China based on mitochondrial DNA.

John Asekhaen Ohiolei, Chen-Yang Xia, Li Li, Jian-Zhi Liu, Wen-Qiang Tang, Yan-Tao Wu, Danqulamu, Guo-Qiang Zhu, Bin Shi, Bao-Quan Fu and 3 more

Open access · goldAbstract read
In one paragraph

Article in Parasites & vectors, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
  2. Five-Year Slaughterhouse-Based Surveillance ofPathogens (Basel, Switzerland) · 2025
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  3. Article
  4. Assembly, Annotation, and Comparative Analysis of Mitochondrial Genomes inInternational journal of molecular sciences · 2024
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Parasitology · 2021
    Article
  13. The Molecular Epidemiology ofPathogens (Basel, Switzerland) · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 2 institutions in 1 country.

John Asekhaen OhioleiState Key Laboratory of Veterinary Etiological Biology/National Professional Laboratory of Animal Hydatidosis, Key Laboratory of Veterinary Parasitology of Gansu Province/Lanzhou Veterinary Research Institute, CAAS, Lanzhou, 730046, Gansu, People's Republic of China.
Chen-Yang XiaInstitute of Animal Science of Tibet Academy of Agricultural and Animal Husbandry Sciences, Lhasa, 854000, Tibet Autonomous Region, People's Republic of China.
Li LiState Key Laboratory of Veterinary Etiological Biology/National Professional Laboratory of Animal Hydatidosis, Key Laboratory of Veterinary Parasitology of Gansu Province/Lanzhou Veterinary Research Institute, CAAS, Lanzhou, 730046, Gansu, People's Republic of China.
Jian-Zhi LiuInstitute of Animal Science of Tibet Academy of Agricultural and Animal Husbandry Sciences, Lhasa, 854000, Tibet Autonomous Region, People's Republic of China.
Wen-Qiang TangInstitute of Animal Science of Tibet Academy of Agricultural and Animal Husbandry Sciences, Lhasa, 854000, Tibet Autonomous Region, People's Republic of China.
Yan-Tao WuState Key Laboratory of Veterinary Etiological Biology/National Professional Laboratory of Animal Hydatidosis, Key Laboratory of Veterinary Parasitology of Gansu Province/Lanzhou Veterinary Research Institute, CAAS, Lanzhou, 730046, Gansu, People's Republic of China.
DanqulamuInstitute of Animal Science of Tibet Academy of Agricultural and Animal Husbandry Sciences, Lhasa, 854000, Tibet Autonomous Region, People's Republic of China.
Guo-Qiang ZhuState Key Laboratory of Veterinary Etiological Biology/National Professional Laboratory of Animal Hydatidosis, Key Laboratory of Veterinary Parasitology of Gansu Province/Lanzhou Veterinary Research Institute, CAAS, Lanzhou, 730046, Gansu, People's Republic of China.
Bin ShiInstitute of Animal Science of Tibet Academy of Agricultural and Animal Husbandry Sciences, Lhasa, 854000, Tibet Autonomous Region, People's Republic of China.
Bao-Quan FuState Key Laboratory of Veterinary Etiological Biology/National Professional Laboratory of Animal Hydatidosis, Key Laboratory of Veterinary Parasitology of Gansu Province/Lanzhou Veterinary Research Institute, CAAS, Lanzhou, 730046, Gansu, People's Republic of China.
Hong YinState Key Laboratory of Veterinary Etiological Biology/National Professional Laboratory of Animal Hydatidosis, Key Laboratory of Veterinary Parasitology of Gansu Province/Lanzhou Veterinary Research Institute, CAAS, Lanzhou, 730046, Gansu, People's Republic of China.
Hong-Bin YanState Key Laboratory of Veterinary Etiological Biology/National Professional Laboratory of Animal Hydatidosis, Key Laboratory of Veterinary Parasitology of Gansu Province/Lanzhou Veterinary Research Institute, CAAS, Lanzhou, 730046, Gansu, People's Republic of China. yanhongbin@caas.cn.
Wan-Zhong JiaState Key Laboratory of Veterinary Etiological Biology/National Professional Laboratory of Animal Hydatidosis, Key Laboratory of Veterinary Parasitology of Gansu Province/Lanzhou Veterinary Research Institute, CAAS, Lanzhou, 730046, Gansu, People's Republic of China. jiawanzhong@caas.cn.
Lanzhou Veterinary Research Institute · CNTibet Academy of Agricultural and Animal Husbandry Sciences · CN

Funding

Central Public-interest Scientific Institution Basal Research Fund, Chinese Academy of Fishery Sciences 1610312016012Central Public-interest Scientific Institution Basal Research Fund, Chinese Academy of Fishery Sciences 1610312017001National Basic Research Program of China (973 Program) 2015CB150300National Key Research and Development Plan 2017YFD0501301Open fund of State Key Laboratory of Veterinary Etiological Biology SKLVEB2016KFKT011
6 · The paper itself

Abstract

backgroundCystic echinococcosis (CE) in humans and livestock is caused by Echinococcus granulosus (sensu lato). In China where CE is endemic, a number of studies have shown that Echinococcus granulosus (sensu stricto) is majorly responsible for CE. However, E. canadensis (G6) which is the second leading cause of CE is now being detected in most parts of the country. In this study, the species diversity and genetic variation of Echinococcus granulosus (s.l.) in four counties in Tibet Autonomous Region of China were investigated.

methodsInfection with Echinococcus granulosus (s.s.) in yaks and sheep was identified using NADH dehydrogenase subunit 1 and 5 (nad1 and nad5) mitochondrial genes while the genotype G6 of E. canadensis initially diagnosed with NADH dehydrogenase subunit 1 (nad1) was further confirmed by analysis of the complete mitochondrial genome and a phylogenetic network constructed based on the nad2 and nad5 genes.

resultsOut of 85 hydatid cyst samples collected from slaughtered sheep (n = 54) and yaks (n = 31), 83 were identified as E. granulosus (s.s.) G1 (n = 77), G3 (n = 6) and 2 were identified as E. canadensis G6. Analysis of the nad1/nad5 genes revealed 16/17 mutations with 9/14 parsimony informative sites resulting in 15/14 haplotypes, respectively. Haplotype diversity (Hd) and nucleotide diversity (π) of E. granulosus (s.s.) population were 0.650 and 0.00127 for nad1 and 0.782 and 0.00306 for nad5, respectively, with an overall negative Tajima's D and Fu's Fs. A low F

conclusionPockets of infection with E. canadensis (G6, G7, G8 and G10) have been previously reported in sheep, goats, yaks and/or humans in different parts of China. While the G6 genotype has been previously reported in sheep in the Tibet Autonomous Region, the detection in a yak in the present study represents the first to the best of our knowledge. Therefore, we recommend future surveys and control efforts to comprehensively investigate other potential intermediate hosts for the prevalence and genetic diversity of the E. canadensis group (G6, G7, G8 and G10) across the country and their inclusion into the existing CE control programme.

Indexed as

Genetic VariationAnimalsCattleCattle DiseasesDNA, HelminthDNA, MitochondrialEchinococcosisEchinococcusGenotypePhylogenySheepSheep DiseasesTibetDNA, HelminthDNA, MitochondrialEchinococcus canadensisGenetic variationHaplotypesTibet Autonomous Region

Identifiers

PMID31881922
PMCPMC6935104
OpenAlexW2998060150

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.