Evidence map›Paper›PMID 31880894›Full record

ArticlePolish journal of microbiology2019

The Composition of Fungal Communities in the Rumen of Gayals (

Houfu Wang, Pengfei Li, Xuchuan Liu, Chunyong Zhang, Qiongfen Lu, Dongmei Xi, Renhui Yang, Shuling Wang, Wenshun Bai, Zhen Yang and 3 more

Abstract read
In one paragraph

Article in Polish journal of microbiology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Houfu WangKey Laboratory of Animal and Feed Science of Yunnan Provincial, Yunnan Agricultural University , Kunming , China.
Pengfei LiKey Laboratory of Animal and Feed Science of Yunnan Provincial, Yunnan Agricultural University , Kunming , China.
Xuchuan LiuFaculty of Animal Science and Technology, Yunnan Agricultural University , Kunming , China.
Chunyong ZhangKey Laboratory of Animal and Feed Science of Yunnan Provincial, Yunnan Agricultural University , Kunming , China ; Faculty of Animal Science and Technology, Yunnan Agricultural University , Kunming , China.
Qiongfen LuKey Laboratory of Animal and Feed Science of Yunnan Provincial, Yunnan Agricultural University , Kunming , China ; Faculty of Animal Science and Technology, Yunnan Agricultural University , Kunming , China.
Dongmei XiFaculty of Animal Science and Technology, Yunnan Agricultural University , Kunming , China.
Renhui YangKey Laboratory of Animal and Feed Science of Yunnan Provincial, Yunnan Agricultural University , Kunming , China.
Shuling WangKey Laboratory of Animal and Feed Science of Yunnan Provincial, Yunnan Agricultural University , Kunming , China.
Wenshun BaiFaculty of Animal Science and Technology, Yunnan Agricultural University , Kunming , China.
Zhen YangFaculty of Animal Science and Technology, Yunnan Agricultural University , Kunming , China.
Rongkang ZhouFaculty of Animal Science and Technology, Yunnan Agricultural University , Kunming , China.
Xiao ChengFaculty of Animal Science and Technology, Yunnan Agricultural University , Kunming , China.
Jing LengKey Laboratory of Animal and Feed Science of Yunnan Provincial, Yunnan Agricultural University , Kunming , China ; Faculty of Animal Science and Technology, Yunnan Agricultural University , Kunming , China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The rumen is a microbial-rich ecosystem in which rumen fungi play an important role in the feed digestion of ruminants. The composition of rumen fungi in free-range ruminants such as gayals, yaks, Tibetan yellow cattle, and the domesticated Yunnan yellow cattle was investigated by sequencing an internal transcribed spacer region 1 (ITS1) using Illumina MiSeq. A total of 285 092 optimized sequences and 904 operational taxonomic units (OTUs) were obtained from the four cattle breeds. The rumen fungi abundance and Chao and Simpson indexes were all higher in free-range ruminants than in domesticated ruminants. Three fungal phyla were identified by sequence comparison: Neocallimastigomycota, Basidiomycota, and Ascomycota. Basidiomycota and Ascomycota have very low abundance in the rumen of four breeds cattle but anaerobic fungi (AF) Neocallimastigomycota occurred in a high abundance. In Neocallimastigomycota, the dominant genera were The rumen is a microbial-rich ecosystem in which rumen fungi play an important role in the feed digestion of ruminants. The composition of rumen fungi in free-range ruminants such as gayals, yaks, Tibetan yellow cattle, and the domesticated Yunnan yellow cattle was investigated by sequencing an internal transcribed spacer region 1 (ITS1) using Illumina MiSeq. A total of 285 092 optimized sequences and 904 operational taxonomic units (OTUs) were obtained from the four cattle breeds. The rumen fungi abundance and Chao and Simpson indexes were all higher in free-range ruminants than in domesticated ruminants. Three fungal phyla were identified by sequence comparison: Neocallimastigomycota, Basidiomycota, and Ascomycota. Basidiomycota and Ascomycota have very low abundance in the rumen of four breeds cattle but anaerobic fungi (AF) Neocallimastigomycota occurred in a high abundance. In Neocallimastigomycota, the dominant genera were

Indexed as

MycobiomeAnimalsCattleChinaFungiPhylogenyRumen

Identifiers

PMID31880894
PMCPMC7260705

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.