Evidence map›Paper›PMID 31880829›Full record

ArticleStatistics in medicine2020

Propensity score-adjusted three-component mixture model for drug-drug interaction data mining in FDA Adverse Event Reporting System.

Xueying Wang, Lang Li, Lei Wang, Weixing Feng, Pengyue Zhang

Abstract read
In one paragraph

Article in Statistics in medicine, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Xueying WangInstitute of Intelligent System and Bioinformatics, College of Automation, Harbin Engineering University, Harbin, China.ORCID 0000-0002-6350-7998
Lang LiDepartment of Biomedical Informatics, College of Medicine, The Ohio State University, Columbus, Ohio.
Lei WangInstitute of Intelligent System and Bioinformatics, College of Automation, Harbin Engineering University, Harbin, China.
Weixing FengInstitute of Intelligent System and Bioinformatics, College of Automation, Harbin Engineering University, Harbin, China.
Pengyue ZhangDepartment of Biomedical Informatics, College of Medicine, The Ohio State University, Columbus, Ohio.ORCID 0000-0002-3592-9042

Funding

Drug-Drug Interactions Involving Antidiabetic AgentsR01DK102694 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI HENNESSY, SEAN, LI, LANG · 2014 to 2017
$2.4M
Evidence-based Drug-Interaction Discovery: In-Vivo, In-Vitro and ClinicalR01LM011945 · NLM · INDIANA UNIVERSITY INDIANAPOLIS · PI LI, LANG, ROCHA, LUIS M · 2014 to 2017
$1.8M
Integrated bioinformatic and pharmacokinetic models of high-dimensional drug interactionsR01GM117206 · NIGMS · INDIANA UNIVERSITY INDIANAPOLIS · PI QUINNEY, SARA K · 2016 to 2018
$1.1M
NIDDK NIH HHS R01 DK102694NIGMS NIH HHS R01 GM117206NIH HHS R01GM117206NIH HHS R01LM011945NLM NIH HHS R01 LM011945
6 · The paper itself

Abstract

With increasing trend of polypharmacy, drug-drug interaction (DDI)-induced adverse drug events (ADEs) are considered as a major challenge for clinical practice. As premarketing clinical trials usually have stringent inclusion/exclusion criteria, limited comedication data capture and often times small sample size have limited values in study DDIs. On the other hand, ADE reports collected by spontaneous reporting system (SRS) become an important source for DDI studies. There are two major challenges in detecting DDI signals from SRS: confounding bias and false positive rate. In this article, we propose a novel approach, propensity score-adjusted three-component mixture model (PS-3CMM). This model can simultaneously adjust for confounding bias and estimate false discovery rate for all drug-drug-ADE combinations in FDA Adverse Event Reporting System (FAERS), which is a preeminent SRS database. In simulation studies, PS-3CMM performs better in detecting true DDIs comparing to the existing approach. It is more sensitive in selecting the DDI signals that have nonpositive individual drug relative ADE risk (NPIRR). The application of PS-3CMM is illustrated in analyzing the FAERS database. Compared to the existing approaches, PS-3CMM prioritizes DDI signals differently. PS-3CMM gives high priorities to DDI signals that have NPIRR. Both simulation studies and FAERS data analysis conclude that our new PS-3CMM is a new method that is complement to the existing DDI signal detection methods.

Indexed as

Drug-Related Side Effects and Adverse ReactionsPharmaceutical PreparationsAdverse Drug Reaction Reporting SystemsDatabases, FactualData MiningDrug InteractionsHumansPropensity ScoreUnited StatesUnited States Food and Drug AdministrationPharmaceutical Preparationsadverse drug eventdrug-drug interactionfalse discovery rateFDA adverse event reporting systempropensity score

Identifiers

PMID31880829
PMCPMC9292662

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.