Evidence map›Paper›PMID 31879905›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2020

Detection of Microtubule Nucleation Hotspots at the Golgi.

Roslin J Thoppil, Anna A W M Sanders, Irina Kaverina

Open access · greenAbstract read
In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.5field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Roslin J ThoppilDepartment of Cell and Developmental Biology, Vanderbilt University, Nashville, TN, USA.
Anna A W M SandersDepartment of Cell and Developmental Biology, Vanderbilt University, Nashville, TN, USA.
Irina KaverinaDepartment of Cell and Developmental Biology, Vanderbilt University, Nashville, TN, USA. irina.kaverina@vanderbilt.edu.
Vanderbilt University · US

Funding

Integrated Biological Systems Training in OncologyT32CA119925 · NCI · VANDERBILT UNIVERSITY · PI Vivian Gama, William Patrick Tansey · 2008 to 2026
$7.6M
Microtubule Regulation of Pancreatic Beta Cell Function and DiabetesR01DK106228 · NIDDK · VANDERBILT UNIVERSITY · PI Guoqiang Gu, William Holmes · 2016 to 2026
$6.4M
Dynamic architecture of microtubule networksR35GM127098 · NIGMS · VANDERBILT UNIVERSITY · PI Irina Kaverina · 2018 to 2026
$4.1M
Spatial Regulation of Cytoskeletal AsymmetryR01GM078373 · NIGMS · VANDERBILT UNIVERSITY · PI KAVERINA, IRINA · 2008 to 2017
$3.2M
NCI NIH HHS T32 CA119925NIDDK NIH HHS R01 DK106228NIGMS NIH HHS R01 GM078373NIGMS NIH HHS R35 GM127098
6 · The paper itself

Abstract

Cell polarization is important for multiple physiological processes. In motile cells, microtubules (MTs) are organized as a polarized array, which is to a large extent comprised of Golgi-derived MTs (GDMTs), which asymmetrically extend toward the cell front. We have recently found that GDMT asymmetry is based on a nonrandom positioning of spatially restricted nucleation hotspots, where MTs form in a cooperative manner. Here, we summarize methods used for GDMT identification including microtubule regrowth after complete drug-induced depolymerization and tracking of growing microtubules using fluorescent MT plus-end-tracking proteins (+TIPs) in living cells, and subsequent detection of those GDMTs that originate from the nucleation hotspots. These approaches can be used for quantification of the spatial distribution of MT nucleation events associated with the Golgi or another large structure.

Indexed as

BiomarkersCell LineCell NucleusFluorescent Antibody TechniqueGolgi ApparatusHumansImmunohistochemistryMicroscopy, FluorescenceMicrotubulesMolecular ImagingTime-Lapse ImagingBiomarkersGolgiHotspotsMicrotubulesMTOCNucleation

Identifiers

PMID31879905
PMCPMC7015078
OpenAlexW2997823426

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.