Evidence map›Paper›PMID 31877759›Full record

ArticleGenes2019

Exploring the Genetic Landscape of Retinal Diseases in North-Western Pakistan Reveals a High Degree of Autozygosity and a Prevalent Founder Mutation in

Atta Ur Rehman, Virginie G Peter, Mathieu Quinodoz, Abdur Rashid, Syed Akhtar Khan, Andrea Superti-Furga, Carlo Rivolta

Abstract read
In one paragraph

Article in Genes, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

  1. Article
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  5. Genetics research · 2025
    Article
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  8. Article
  9. Article
  10. Article
  11. Article
  12. Observational
  13. Next-Generation Sequencing Applications for Inherited Retinal Diseases.International journal of molecular sciences · 2021
    Review
  14. Article
  15. Article
  16. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Atta Ur RehmanDivision of Genetic Medicine, Lausanne University Hospital and University of Lausanne, 1011 Lausanne, Switzerland.
Virginie G PeterInstitute of Experimental Pathology, Lausanne University Hospital and University of Lausanne, 1011 Lausanne, Switzerland.
Mathieu QuinodozDepartment of Genetics and Genome Biology, University of Leicester, Leicester LE1 7RH, UK.
Abdur RashidGovernment Degree College Ara Khel, FR Kohat 26000, Khyber Pakhtunkhwa, Pakistan.
Syed Akhtar KhanDepartment of Ophthalmology, Khalifa Gul Nawaz Hospital, Bannu 28100, Pakistan.
Andrea Superti-FurgaDivision of Genetic Medicine, Lausanne University Hospital and University of Lausanne, 1011 Lausanne, Switzerland.
Carlo RivoltaDepartment of Genetics and Genome Biology, University of Leicester, Leicester LE1 7RH, UK.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Variants in more than 271 different genes have been linked to hereditary retinal diseases, making comprehensive genomic approaches mandatory for accurate diagnosis. We explored the genetic landscape of retinal disorders in consanguineous families from North-Western Pakistan, harboring a population of approximately 35 million inhabitants that remains relatively isolated and highly inbred (~50% consanguinity). We leveraged on the high degree of consanguinity by applying genome-wide high-density single-nucleotide polymorphism (SNP) genotyping followed by targeted Sanger sequencing of candidate gene(s) lying inside autozygous intervals. In addition, we performed whole-exome sequencing (WES) on at least one proband per family. We identified 7 known and 4 novel variants in a total of 10 genes (

Indexed as

MutationATP-Binding Cassette TransportersConsanguinityDNA Mutational AnalysisExome SequencingFemaleFounder EffectHumansMaleNicotinamide-Nucleotide AdenylyltransferasePakistanPedigreePrevalenceRetinal DiseasesSequence Analysis, DNAABCA4 protein, humanATP-Binding Cassette TransportersNicotinamide-Nucleotide AdenylyltransferaseNMNAT1 protein, humanautozygosity mappingconsanguinityhereditary retinal diseasesPakistan

Identifiers

PMID31877759
PMCPMC7017091

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.