Evidence map›Paper›PMID 31877410›Full record

ArticleMolecular therapy. Nucleic acids2020

The Circular RNome of Developmental Retina in Mice.

Xue-Jiao Chen, Zi-Cheng Zhang, Xiao-Yun Wang, Heng-Qiang Zhao, Meng-Lan Li, Yue Ma, Yang-Yang Ji, Chang-Jun Zhang, Kun-Chao Wu, Lue Xiang and 3 more

Open access · goldAbstract read
In one paragraph

Article in Molecular therapy. Nucleic acids, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 30 citations in OpenAlex.

  1. Review
  2. Review
  3. Development of Mathematical Models Using circRNA Combinations (International journal of molecular sciences · 2025
    Article
  4. Article
  5. Review
  6. Epigenetic Switches in Retinal Homeostasis and Target for Drug Development.International journal of molecular sciences · 2024
    Review
  7. Article
  8. Emerging roles of circular RNAs in retinal diseases.Neural regeneration research · 2022
    Review
  9. Role of circRNA in pathogenesis of AlzheimerZhong nan da xue xue bao. Yi xue ban = Journal of Central South University. Medical sciences · 2022
    Article
  10. Article
  11. Review
  12. Review
  13. Article
  14. Article
  15. Retinal Degeneration Caused by Ago2 Disruption.Investigative ophthalmology & visual science · 2021
    Article
  16. Review
  17. Circular RNAs in the Central Nervous System.Frontiers in molecular biosciences · 2021
    Review
  18. Article
  19. CircRNA Is a Rising Star in Researches of Ocular Diseases.Frontiers in cell and developmental biology · 2020
    Review
  20. Abundant Neural circRNA Cdr1as Is Not Indispensable for Retina Maintenance.Frontiers in cell and developmental biology · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 1 institution in 1 country.

Xue-Jiao ChenLaboratory for Stem Cell and Retinal Regeneration, Institute of Stem Cell Research, Division of Ophthalmic Genetics, The Eye Hospital, Wenzhou Medical University, Wenzhou 325027, China; State Key Laboratory of Ophthalmology, Optometry and Vision Science, Wenzhou Medical University, National Center for International Research in Regenerative Medicine and Neurogenetics, Wenzhou 325027, China.
Zi-Cheng ZhangSchool of Ophthalmology & Optometry and Eye Hospital, School of Biomedical Engineering, Wenzhou Medical University, Wenzhou 325027, China.
Xiao-Yun WangLaboratory for Stem Cell and Retinal Regeneration, Institute of Stem Cell Research, Division of Ophthalmic Genetics, The Eye Hospital, Wenzhou Medical University, Wenzhou 325027, China; State Key Laboratory of Ophthalmology, Optometry and Vision Science, Wenzhou Medical University, National Center for International Research in Regenerative Medicine and Neurogenetics, Wenzhou 325027, China.
Heng-Qiang ZhaoSchool of Ophthalmology & Optometry and Eye Hospital, School of Biomedical Engineering, Wenzhou Medical University, Wenzhou 325027, China.
Meng-Lan LiLaboratory for Stem Cell and Retinal Regeneration, Institute of Stem Cell Research, Division of Ophthalmic Genetics, The Eye Hospital, Wenzhou Medical University, Wenzhou 325027, China; State Key Laboratory of Ophthalmology, Optometry and Vision Science, Wenzhou Medical University, National Center for International Research in Regenerative Medicine and Neurogenetics, Wenzhou 325027, China.
Yue MaLaboratory for Stem Cell and Retinal Regeneration, Institute of Stem Cell Research, Division of Ophthalmic Genetics, The Eye Hospital, Wenzhou Medical University, Wenzhou 325027, China; State Key Laboratory of Ophthalmology, Optometry and Vision Science, Wenzhou Medical University, National Center for International Research in Regenerative Medicine and Neurogenetics, Wenzhou 325027, China.
Yang-Yang JiLaboratory for Stem Cell and Retinal Regeneration, Institute of Stem Cell Research, Division of Ophthalmic Genetics, The Eye Hospital, Wenzhou Medical University, Wenzhou 325027, China; State Key Laboratory of Ophthalmology, Optometry and Vision Science, Wenzhou Medical University, National Center for International Research in Regenerative Medicine and Neurogenetics, Wenzhou 325027, China.
Chang-Jun ZhangLaboratory for Stem Cell and Retinal Regeneration, Institute of Stem Cell Research, Division of Ophthalmic Genetics, The Eye Hospital, Wenzhou Medical University, Wenzhou 325027, China; State Key Laboratory of Ophthalmology, Optometry and Vision Science, Wenzhou Medical University, National Center for International Research in Regenerative Medicine and Neurogenetics, Wenzhou 325027, China.
Kun-Chao WuLaboratory for Stem Cell and Retinal Regeneration, Institute of Stem Cell Research, Division of Ophthalmic Genetics, The Eye Hospital, Wenzhou Medical University, Wenzhou 325027, China; State Key Laboratory of Ophthalmology, Optometry and Vision Science, Wenzhou Medical University, National Center for International Research in Regenerative Medicine and Neurogenetics, Wenzhou 325027, China.
Lue XiangLaboratory for Stem Cell and Retinal Regeneration, Institute of Stem Cell Research, Division of Ophthalmic Genetics, The Eye Hospital, Wenzhou Medical University, Wenzhou 325027, China; State Key Laboratory of Ophthalmology, Optometry and Vision Science, Wenzhou Medical University, National Center for International Research in Regenerative Medicine and Neurogenetics, Wenzhou 325027, China.
Lan-Fang SunLaboratory for Stem Cell and Retinal Regeneration, Institute of Stem Cell Research, Division of Ophthalmic Genetics, The Eye Hospital, Wenzhou Medical University, Wenzhou 325027, China; State Key Laboratory of Ophthalmology, Optometry and Vision Science, Wenzhou Medical University, National Center for International Research in Regenerative Medicine and Neurogenetics, Wenzhou 325027, China.
Meng ZhouState Key Laboratory of Ophthalmology, Optometry and Vision Science, Wenzhou Medical University, National Center for International Research in Regenerative Medicine and Neurogenetics, Wenzhou 325027, China; School of Ophthalmology & Optometry and Eye Hospital, School of Biomedical Engineering, Wenzhou Medical University, Wenzhou 325027, China. Electronic address: zhoumeng@wmu.edu.cn.
Zi-Bing JinLaboratory for Stem Cell and Retinal Regeneration, Institute of Stem Cell Research, Division of Ophthalmic Genetics, The Eye Hospital, Wenzhou Medical University, Wenzhou 325027, China; State Key Laboratory of Ophthalmology, Optometry and Vision Science, Wenzhou Medical University, National Center for International Research in Regenerative Medicine and Neurogenetics, Wenzhou 325027, China. Electronic address: jinzb@mail.eye.ac.cn.
Wenzhou Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Circular RNAs (circRNAs) represent a class of noncoding RNAs with a wide expression pattern, and they constitute an important layer of the genome regulatory network. To date, the expression pattern and regulatory potency of circRNAs in the retina, a key part of the central nervous system, are not yet well understood. In this study, RNAs from five stages (E18.5, P1, P7, P14, and P30) of mouse retinal development were sequenced. A total of 9,029 circRNAs were identified. Most circRNAs were expressed in different stages with a specific signature, and their expression patterns were different from those of their host linear transcripts. Some circRNAs could act as sponges for several retinal microRNAs (miRNAs). Furthermore, circTulp4 could function as a competitive endogenous RNA (ceRNA) to regulate target genes. Remarkably, silencing circTulp4 in vivo led to mice having a thin outer nuclear layer (ONL) and defective retinal function. In addition, we found that circRNAs were dysregulated at a much earlier time point than that of disease onset in a retinal degeneration model (rd8 mice). In summary, we provide the first circRNA expression atlas during retinal development and highlight a key biological role for circRNAs in retinal development and degeneration.

Indexed as

circTulp4circular RNA (circRNA)competing endogenous RNAs (ceRNA)miRNA spongesretinal degenerationretinal development

Identifiers

PMID31877410
PMCPMC6938940
OpenAlexW2991568337

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.