Evidence map›Paper›PMID 31877307›Full record

ReviewExperimental cell research2020

Human artificial chromosome (HAC) for measuring chromosome instability (CIN) and identification of genes required for proper chromosome transmission.

Natalay Kouprina, Mikhail Liskovykh, Nikolai Petrov, Vladimir Larionov

Open access · hybridAbstract readReview
In one paragraph

Review in Experimental cell research, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.6field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Review
  3. Inherited and de novo variants extend the etiology ofCold Spring Harbor molecular case studies · 2022
    Article
  4. Review
  5. Human AlphoidCells · 2020
    Article
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Natalay KouprinaDevelopmental Therapeutics Branch, National Cancer Institute, NIH, Bethesda, MD, 20892, USA. Electronic address: kouprinn@mail.nih.gov.
Mikhail LiskovykhDevelopmental Therapeutics Branch, National Cancer Institute, NIH, Bethesda, MD, 20892, USA.
Nikolai PetrovDevelopmental Therapeutics Branch, National Cancer Institute, NIH, Bethesda, MD, 20892, USA.
Vladimir LarionovDevelopmental Therapeutics Branch, National Cancer Institute, NIH, Bethesda, MD, 20892, USA.
National Cancer Institute · US

Funding

Study of hereditary prostate cancer and human artificial chromosomesZIABC010413 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI LARIONOV, VLADIMIR · 2009 to 2025
$31.5M
Intramural NIH HHS Z99 CA999999Intramural NIH HHS ZIA BC010413
6 · The paper itself

Abstract

Chromosomal instability (CIN) is one of the characteristics of cancer inherent for tumor initiation and progression, which is defined as a persistent, high rate of gain/loss of whole chromosomes. In the vast majority of human tumors the molecular basis of CIN remains unknown. The development of a conceptually simple colony color sectoring assay that measures yeast artificial chromosome (YAC) loss provided a powerful genetic tool to assess the rate of chromosome mis-segregation and also identified 937 yeast genes involved in this process. Similarly, a human artificial chromosome (HAC)-based assay has been recently developed and applied to quantify chromosome mis-segregation events in human cells. This assay allowed identification of novel human CIN genes in the library of protein kinases. Among them are PINK1, TRIO, IRAK1, PNCK, and TAOK1. The HAC-based assay may be applied to screen siRNA, shRNA and CRISPR-based libraries to identify the complete spectrum of CIN genes. This will reveal new insights into mechanisms of chromosome segregation and may expedite the development of novel therapeutic strategies to target the CIN phenotype in cancer cells.

Indexed as

Chromosomal InstabilityChromosomes, Artificial, HumanChromosome SegregationHumansNeoplasmsProtein KinasesRNA, Small InterferingTransgenesProtein KinasesRNA, Small InterferingChromosome instabilityCINHACHuman artificial chromosomeHuman CIN genesIRAK1PINK1PNCKTAOK1TRIO

Identifiers

PMID31877307
PMCPMC7029811
OpenAlexW2998665296

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.