Evidence map›Paper›PMID 31877197›Full record

ArticlePloS one2019

Comprehensive analysis of putative dihydroflavonol 4-reductase gene family in tea plant.

Xin Mei, Caibi Zhou, Wenting Zhang, Dylan O'Neill Rothenberg, Shihua Wan, Lingyun Zhang

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.5field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Xin MeiSouth China Botanical Garden, Chinese Academy of Sciences, Guangzhou, Guangdong, China.ORCID 0000-0002-5642-6209
Caibi ZhouCollege of Horticulture Science, South China Agricultural University, Guangzhou, Guangdong, China.
Wenting ZhangCollege of Horticulture Science, South China Agricultural University, Guangzhou, Guangdong, China.
Dylan O'Neill RothenbergCollege of Horticulture Science, South China Agricultural University, Guangzhou, Guangdong, China.
Shihua WanCollege of Horticulture Science, South China Agricultural University, Guangzhou, Guangdong, China.
Lingyun ZhangCollege of Horticulture Science, South China Agricultural University, Guangzhou, Guangdong, China.
South China Agricultural University · CNSouth China Botanical Garden · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

One identified dihydroflavonol 4-reductases (DFR) encoding gene (named as CsDFRa herein) and five putative DFRs (named as CsDFRb1, CsDFRb2, CsDFRb3, CsDFRc and CsDFRd) in tea (Camellia sinensis) have been widely discussed in recent papers concerning multi-omics data. However, except for CsDFRa, their function and biochemical characteristics are not clear. This study aims to compare all putative CsDFRs and preliminarily evaluate their function. We investigated the sequences of genes (coding and promoter regions) and predicted structures of proteins encoded, and determined the activities of heterologously expressed CsDFRs under various conditions. The results showed that the sequences of five putative CsDFRs were quite different from CsDFRa, and had lower expression levels as well. The five putative CsDFRs could not catalyze three dihydroflavonol substrates. The functional CsDFRa had the strongest affinity with dihydroquercetin, and performed best at pH around 7 and 35°C but was not stable at lower pHs or higher temperatures. Single amino acid mutation at position 141 modified the preference of CsDFRa for dihydroquercetin and dihydromyricetin, and also weakened its stability. These data suggest that only CsDFRa works in the pathway for generating anthocyanidins and catechins. This study provides new insights into the function of CsDFRs and may assist to develop new strategies to manipulate the composition of tea flavonoids in the future.

Indexed as

Alcohol OxidoreductasesAmino Acid SequenceCamellia sinensisGene Expression Regulation, PlantModels, MolecularMultigene FamilyPhylogenyPlant ProteinsSequence AlignmentAlcohol Oxidoreductasesdihydroflavanol 4-reductasePlant Proteins

Identifiers

PMID31877197
PMCPMC6932780
OpenAlexW2997086719

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.