Evidence map›Paper›PMID 31876398›Full record

ReviewMolecular genetics & genomic medicine2020

Novel VAC14 variants identified in two Chinese siblings with childhood-onset striatonigral degeneration.

Shuang Liao, Tingting Chen, Ying Dai, Yanqin Wang, Fangrui Wu, Min Zhong

Open access · goldAbstract readCase ReportsReview
In one paragraph

Review in Molecular genetics & genomic medicine, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.6field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Blepharoclonus - a novel phenotypic association with a VAC14 variant.Clinical parkinsonism & related disorders · 2025
    Article
  5. Article
  6. Article
  7. Article
  8. Roles of PIKfyve in multiple cellular pathways.Current opinion in cell biology · 2022
    Review
  9. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Shuang LiaoDepartment of Neurology, Children's Hospital of Chongqing Medical University, Chongqing, China.
Tingting ChenDepartment of Neurology, Children's Hospital of Chongqing Medical University, Chongqing, China.
Ying DaiChina International Science and Technology Cooperation Base of Child Development and Critical Disorders, Chongqing Engineering Research Center of Stem Cell Therapy, National Clinical Research Center for Child Health and Disorders, Ministry of Education Key Laboratory of Child Development and Disorders, Pediatric Research Institute, Chongqing, China.
Yanqin WangDepartment of Neurology, Children's Hospital of Chongqing Medical University, Chongqing, China.
Fangrui WuDepartment of Neurology, Children's Hospital of Chongqing Medical University, Chongqing, China.
Min ZhongDepartment of Neurology, Children's Hospital of Chongqing Medical University, Chongqing, China.ORCID 0000-0002-0546-9663
China International Science and Technology Cooperation · CNFujian Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundVAC14 is a component of a trimolecular complex that tightly regulates the level of phosphatidylinositol 3,5-bisphosphate [PI (3,5) P2]. VAC14 pathogenic variants cause prominent vacuolation of neurons in basal ganglia of patients with childhood-onset striatonigral degeneration (SNDC).

methodsWe identified two siblings with SNDC. Whole-exome sequencing was performed for genetic molecular analysis in these probands.

resultsThe patients were compound heterozygotes for two novel variants in the VAC14 gene, p.Ala582Thr and p.Arg681His. The pathogenicity of these variants was indicated by a bioinformatic study and protein three-dimensional modeling. Eight previously reported SNDC cases and a Yunis-Varón syndrome caused by VAC14 mutations were summarized and compared.

conclusionWe present novel compound heterozygous variants (c.1744G>A/c.2042G>A) in our proband, and these novel variants were predicted to be likely pathogenic. The affected siblings were clinically severe and lethal; their phenotypes were similar to the majority of previously reported SNDC cases, with the exception of two cases that showed mild clinical manifestations. VAC14 pathogenic variants may be associated with various phenotypes. Herein, we report the Chinese siblings with SNDC, they are the first Asian cases. Our results expanded the spectrum of VAC14 pathogenic variants and the ethnic backgrounds of the affected cases.

Indexed as

MutationAdultChildChild, PreschoolFemaleHumansIntracellular Signaling Peptides and ProteinsMaleMembrane ProteinsPedigreeProtein DomainsStriatonigral DegenerationIntracellular Signaling Peptides and ProteinsMembrane ProteinsVAC14 protein, humanbasal gangliastriatonigral degenerationVAC14variantwhole-exome sequencing

Identifiers

PMID31876398
PMCPMC7005630
OpenAlexW2998012741

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.