Evidence map›Paper›PMID 31876313›Full record

ArticleJournal of pineal research2020

Structural characterization of melatonin as an inhibitor of the Wnt deacylase Notum.

Yuguang Zhao, Jingshan Ren, James Hillier, Margaret Jones, Weixian Lu, Edith Yvonne Jones

Open access · hybridAbstract read
In one paragraph

Article in Journal of pineal research, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.5field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
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  9. Article
  10. Structural Insights into Notum Covalent Inhibition.Journal of medicinal chemistry · 2021
    Article
  11. Review
  12. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Yuguang ZhaoDivision of Structural Biology, Wellcome Centre for Human Genetics, University of Oxford, Oxford, UK.ORCID https://orcid.org/0000-0001-8916-8552
Jingshan RenDivision of Structural Biology, Wellcome Centre for Human Genetics, University of Oxford, Oxford, UK.ORCID https://orcid.org/0000-0003-4015-1404
James HillierDivision of Structural Biology, Wellcome Centre for Human Genetics, University of Oxford, Oxford, UK.ORCID https://orcid.org/0000-0002-4617-8504
Margaret JonesDivision of Structural Biology, Wellcome Centre for Human Genetics, University of Oxford, Oxford, UK.
Weixian LuDivision of Structural Biology, Wellcome Centre for Human Genetics, University of Oxford, Oxford, UK.
Edith Yvonne JonesDivision of Structural Biology, Wellcome Centre for Human Genetics, University of Oxford, Oxford, UK.ORCID https://orcid.org/0000-0002-3834-1893
Centre for Human Genetics · GB

Funding

Cancer Research UK 17721Cancer Research UK C375/A17721Medical Research Council MR/M000141/1Wellcome TrustWellcome Trust 203141/Z/16/Z
6 · The paper itself

Abstract

The hormone melatonin, secreted from the pineal gland, mediates multiple physiological effects including modulation of Wnt/β-catenin signalling. The Wnt palmitoleate lipid modification is essential for its signalling activity, while the carboxylesterase Notum can remove the lipid from Wnt and inactivate it. Notum enzyme inhibition can therefore upregulate Wnt signalling. While searching for Notum inhibitors by crystallographic fragment screening, a hit compound N-[2-(5-fluoro-1H-indol-3-yl)ethyl]acetamide that is structurally similar to melatonin came to our attention. We then soaked melatonin and its precursor N-acetylserotonin into Notum crystals and obtained high-resolution structures (≤1.5 Å) of their complexes. In each of the structures, two compound molecules bind with Notum: one at the enzyme's catalytic pocket, overlapping the space occupied by the acyl tail of the Wnt palmitoleate lipid, and the other at the edge of the pocket opposite the substrate entrance. Although the inhibitory activity of melatonin shown by in vitro enzyme assays is low (IC

Indexed as

Binding SitesCrystallography, X-RayEnzyme InhibitorsEsterasesHumansMelatoninStructure-Activity RelationshipEnzyme InhibitorsEsterasesMelatoninNotum protein, humancrystal structurefragment screenmelatoninNotumWnt signalling

Identifiers

PMID31876313
PMCPMC7027535
OpenAlexW2997064714

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.