Evidence map›Paper›PMID 31876031›Full record

ArticleMolecular microbiology2020

One evolutionarily selected amino acid variation is sufficient to provide functional specificity in the cold shock protein paralogs of Staphylococcus aureus.

Arancha Catalan-Moreno, Carlos J Caballero, Naiara Irurzun, Sergio Cuesta, Jacinto López-Sagaseta, Alejandro Toledo-Arana

Open access · hybridAbstract read
In one paragraph

Article in Molecular microbiology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Natural variation of immune epitopes reveals intrabacterial antagonism.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  5. Article
  6. Article
  7. Regulation of Heterogenous LexA Expression inInternational journal of molecular sciences · 2022
    Article
  8. Article
  9. Microorganisms · 2021
    Review
  10. Article
  11. Review
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Arancha Catalan-MorenoInstituto de Agrobiotecnología (IDAB), CSIC-UPNA-Gobierno de Navarra, Mutilva, Spain.ORCID 0000-0003-2316-4633
Carlos J CaballeroInstituto de Agrobiotecnología (IDAB), CSIC-UPNA-Gobierno de Navarra, Mutilva, Spain.ORCID 0000-0003-1255-6076
Naiara IrurzunInstituto de Agrobiotecnología (IDAB), CSIC-UPNA-Gobierno de Navarra, Mutilva, Spain.
Sergio CuestaInstituto de Agrobiotecnología (IDAB), CSIC-UPNA-Gobierno de Navarra, Mutilva, Spain.
Jacinto López-SagasetaLaboratory of Protein Crystallography, Navarrabiomed, Complejo Hospitalario de Navarra (CHN)-Universidad Pública de Navarra (UPNA), Pamplona, Spain.ORCID 0000-0002-7774-4361
Alejandro Toledo-AranaInstituto de Agrobiotecnología (IDAB), CSIC-UPNA-Gobierno de Navarra, Mutilva, Spain.ORCID 0000-0001-8148-6281
Gobierno de Navarra · ESUniversidad Publica de Navarra · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bacterial genomes encode several families of protein paralogs. Discrimination between functional divergence and redundancy among paralogs is challenging due to their sequence conservation. Here, we investigated whether the amino acid differences present in the cold shock protein (CSP) paralogs of Staphylococcus aureus were responsible for functional specificity. Since deletion of cspA reduces the synthesis of staphyloxanthin (STX), we used it as an in vivo reporter of CSP functionality. Complementation of a ΔcspA strain with the different S. aureus CSP variants showed that only CspA could specifically restore STX production by controlling the activity of the stress-associated sigma B factor (σ

Indexed as

Amino Acid SubstitutionBacterial ProteinsCold Shock Proteins and PeptidesEvolution, MolecularGene Expression Regulation, BacterialGenetic Complementation TestStaphylococcus aureusBacterial Proteinscold shock protein CS7.4, BacteriaCold Shock Proteins and Peptidescold shock proteinsCspAprotein paralogsprotein specificityRNA chaperoneStaphylococcus aureus

Identifiers

PMID31876031
PMCPMC7216892
OpenAlexW2997837130

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.