Evidence map›Paper›PMID 31875970›Full record

ArticleHepatology (Baltimore, Md.)2020

Identification of Four Immune Subtypes Characterized by Distinct Composition and Functions of Tumor Microenvironment in Intrahepatic Cholangiocarcinoma.

Sylvie Job, Delphine Rapoud, Alexandre Dos Santos, Patrick Gonzalez, Christophe Desterke, Gérard Pascal, Nabila Elarouci, Mira Ayadi, René Adam, Daniel Azoulay and 10 more

Abstract read
In one paragraph

Article in Hepatology (Baltimore, Md.), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 211 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
211citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

211 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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  7. A Phase II Trial of Pembrolizumab plus Granulocyte-Macrophage Colony-Stimulating Factor in Advanced Biliary Cancer.Clinical cancer research : an official journal of the American Association for Cancer Research · 2026
    Article
  8. Article
  9. Advances in Immunotherapy for Intrahepatic Cholangiocarcinoma.International journal of molecular sciences · 2026
    Review
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151 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors.

Sylvie JobProgramme Cartes d'Identité des Tumeurs, Ligue Nationale Contre le Cancer, Paris, France.
Delphine RapoudHepatobiliary Centre, INSERM, U1193, Paul-Brousse University Hospital, Villejuif, France.
Alexandre Dos SantosHepatobiliary Centre, INSERM, U1193, Paul-Brousse University Hospital, Villejuif, France.
Patrick GonzalezHepatobiliary Centre, INSERM, U1193, Paul-Brousse University Hospital, Villejuif, France.
Christophe DesterkeFaculté de Médecine du Kremlin Bicetre, University Paris-Sud, Université Paris-Saclay, Le Kremlin-Bicêtre, France.
Gérard PascalHepatobiliary Centre, INSERM, U1193, Paul-Brousse University Hospital, Villejuif, France.
Nabila ElarouciProgramme Cartes d'Identité des Tumeurs, Ligue Nationale Contre le Cancer, Paris, France.
Mira AyadiProgramme Cartes d'Identité des Tumeurs, Ligue Nationale Contre le Cancer, Paris, France.
René AdamHepatobiliary Centre, INSERM, U1193, Paul-Brousse University Hospital, Villejuif, France.
Daniel AzoulayHepatobiliary Centre, INSERM, U1193, Paul-Brousse University Hospital, Villejuif, France.
Denis CastaingHepatobiliary Centre, INSERM, U1193, Paul-Brousse University Hospital, Villejuif, France.
Eric VibertHepatobiliary Centre, INSERM, U1193, Paul-Brousse University Hospital, Villejuif, France.
Daniel CherquiHepatobiliary Centre, INSERM, U1193, Paul-Brousse University Hospital, Villejuif, France.
Didier SamuelHepatobiliary Centre, INSERM, U1193, Paul-Brousse University Hospital, Villejuif, France.
Antonio Sa CuhnaHepatobiliary Centre, INSERM, U1193, Paul-Brousse University Hospital, Villejuif, France.
Agnès MarchioUnité 'Organisation Nucléaire et Oncogenèse', INSERM U993, Institut Pasteur, Paris, France.
Pascal PineauUnité 'Organisation Nucléaire et Oncogenèse', INSERM U993, Institut Pasteur, Paris, France.ORCID 0000-0002-9407-1592
Catherine GuettierHepatobiliary Centre, INSERM, U1193, Paul-Brousse University Hospital, Villejuif, France.
Aurélien de ReynièsProgramme Cartes d'Identité des Tumeurs, Ligue Nationale Contre le Cancer, Paris, France.
Jamila FaivreHepatobiliary Centre, INSERM, U1193, Paul-Brousse University Hospital, Villejuif, France.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

BACKGROUND AND

aimsIntrahepatic cholangiocarcinoma (ICC) is a severe malignant tumor in which the standard therapies are mostly ineffective. The biological significance of the desmoplastic tumor microenvironment (TME) of ICC has been stressed but was insufficiently taken into account in the search for classifications of ICC adapted to clinical trial design. We investigated the heterogeneous tumor stroma composition and built a TME-based classification of ICC tumors that detects potentially targetable ICC subtypes. APPROACH AND

resultsWe established the bulk gene expression profiles of 78 ICCs. Epithelial and stromal compartments of 23 ICCs were laser microdissected. We quantified 14 gene expression signatures of the TME and those of 3 functional indicators (liver activity, inflammation, immune resistance). The cell population abundances were quantified using the microenvironment cell population-counter package and compared with immunohistochemistry. We performed an unsupervised TME-based classification of 198 ICCs (training set) and 368 ICCs (validation set). We determined immune response and signaling features of the different immune subtypes by functional annotations. We showed that a set of 198 ICCs could be classified into 4 TME-based subtypes related to distinct immune escape mechanisms and patient outcomes. The validity of these immune subtypes was confirmed over an independent set of 368 ICCs and by immunohistochemical analysis of 64 ICC tissue samples. About 45% of ICCs displayed an immune desert phenotype. The other subtypes differed in nature (lymphoid, myeloid, mesenchymal) and abundance of tumor-infiltrating cells. The inflamed subtype (11%) presented a massive T lymphocyte infiltration, an activation of inflammatory and immune checkpoint pathways, and was associated with the longest patient survival.

conclusionWe showed the existence of an inflamed ICC subtype, which is potentially treatable with checkpoint blockade immunotherapy.

Indexed as

Bile Duct NeoplasmsCholangiocarcinomaBile Ducts, IntrahepaticDrug DiscoveryFemaleHumansImmune Checkpoint InhibitorsImmunityImmunohistochemistryImmunophenotypingInflammationMaleMiddle AgedPrognosisSignal TransductionTranscriptomeImmune Checkpoint Inhibitors

Identifiers

PMID31875970
PMCPMC7589418

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.