Evidence map›Paper›PMID 31875036›Full record

ArticleScientific reports2019

Transcriptome analysis in roots and leaves of wheat seedlings in response to low-phosphorus stress.

Jun Wang, Qin Qin, Jianjun Pan, Lijuan Sun, Yafei Sun, Yong Xue, Ke Song

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
14.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 99 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Characterizing the wheat (Frontiers in plant science · 2025
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Transcriptomics Insights into Phosphorus Stress Response ofInternational journal of molecular sciences · 2023
    Article
  11. Article
  12. Protoplast Isolation for Plant Single-Cell RNA-seq.Methods in molecular biology (Clifton, N.J.) · 2023
    Article
  13. Article
  14. Article
  15. Article
  16. Role of WheatGenes · 2022
    Article
  17. Review
  18. Article
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Jun WangEco-environmental Protection Research Institute, Shanghai Academy of Agricultural Sciences, Shanghai, 201403, China.
Qin QinEco-environmental Protection Research Institute, Shanghai Academy of Agricultural Sciences, Shanghai, 201403, China.
Jianjun PanCollege of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing, 210095, China.
Lijuan SunEco-environmental Protection Research Institute, Shanghai Academy of Agricultural Sciences, Shanghai, 201403, China.
Yafei SunEco-environmental Protection Research Institute, Shanghai Academy of Agricultural Sciences, Shanghai, 201403, China.
Yong XueEco-environmental Protection Research Institute, Shanghai Academy of Agricultural Sciences, Shanghai, 201403, China. exueyong@163.com.
Ke SongEco-environmental Protection Research Institute, Shanghai Academy of Agricultural Sciences, Shanghai, 201403, China. songke115@aliyun.com.
Shanghai Academy of Agricultural Sciences · CNNanjing Agricultural University · CNNano Carbon (Poland) · PL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Low phosphorus availability is a major abiotic factor constraining wheat growth. The molecular mechanisms of the wheat whole genome under low-phosphorus stress are still unclear. To obtain information on gene expression in wheat seedlings under low-phosphorus stress, transcriptome sequencing was performed on roots and leaves. The results showed that 2,318 (1,646 upregulated and 672 downregulated) transcripts were differentially expressed in the leaves, and 2,018 (1,310 upregulated and 708 downregulated) were differentially expressed in the roots. Further analysis showed that these differentially expressed genes (DEGs) were mainly enriched in carbon fixation in photosynthetic organs and in carbon metabolism, photosynthesis, glyoxylate and dicarboxylate metabolism and plant-pathogen interaction in both leaves and roots. These pathways were mainly associated with environmental adaptation, energy metabolism and carbohydrate metabolism, suggesting that the metabolic processes were strengthened in wheat seedlings under low-phosphorus stress and that more energy and substances were produced to resist or adapt to this unfavourable environment. This research might provide potential directions and valuable resources to further study wheat under low-phosphorus stress.

Indexed as

Gene Expression Regulation, PlantTranscriptomeBiomassCarbon CycleEnergy MetabolismGene Expression ProfilingHost-Pathogen InteractionsPhosphorusPhotosynthesisPlant LeavesPlant ProteinsPlant RootsSeedlingsStress, PhysiologicalTriticumPhosphorusPlant Proteins

Identifiers

PMID31875036
PMCPMC6930268
OpenAlexW2997768682

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.