Evidence map›Paper›PMID 31875014›Full record

ArticleScientific reports2019

Raman spectroscopy as a non-invasive diagnostic technique for endometriosis.

Ugur Parlatan, Medine Tuna Inanc, Bahar Yuksel Ozgor, Engin Oral, Ercan Bastu, Mehmet Burcin Unlu, Gunay Basar

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
9.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 64 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Ugur ParlatanBogazici University, Physics Department, Istanbul, 34470, Turkey. ugur.parlatan@boun.edu.tr.ORCID http://orcid.org/0000-0001-7106-5993
Medine Tuna InancBogazici University, Physics Department, Istanbul, 34470, Turkey.
Bahar Yuksel OzgorEsenler Maternity and Children's Hospital Obstetrics and Gynecology Department, Istanbul, 34230, Turkey.
Engin OralIstanbul University Cerrahpasa School of Medicine, Reproductive Endocrinology and Infertility Division, Obstetrics and Gynecology Department, Istanbul, 34301, Turkey.
Ercan BastuAcibadem University School of Medicine, Department of Obstetrics and Gynecology, Istanbul, 34752, Turkey.
Mehmet Burcin UnluBogazici University, Physics Department, Istanbul, 34470, Turkey.
Gunay BasarIstanbul Technical University, Physics Engineering Department, Istanbul, 34469, Turkey.
Boğaziçi University · TRAcıbadem University · TRIstanbul Technical University · TRIstanbul University-Cerrahpaşa · TR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Endometriosis is a condition in which the endometrium, the layer of tissue that usually covers the inside of the uterus, grows outside the uterus. One of its severe effects is sub-fertility. The exact reason for endometriosis is still unknown and under investigation. Tracking the symptoms is not sufficient for diagnosing the disease. A successful diagnosis can only be made using laparoscopy. During the disease, the amount of some molecules (i.e., proteins, antigens) changes in the blood. Raman spectroscopy provides information about biochemicals without using dyes or external labels. In this study, Raman spectroscopy is used as a non-invasive diagnostic method for endometriosis. The Raman spectra of 94 serum samples acquired from 49 patients and 45 healthy individuals were compared for this study. Principal Component Analysis (PCA), k- Nearest Neighbors (kNN), and Support Vector Machines (SVM) were used in the analysis. According to the results (using 80 measurements for training and 14 measurements for the test set), it was found that kNN-weighted gave the best classification model with sensitivity and specificity values of 80.5% and 89.7%, respectively. Testing the model with unseen data yielded a sensitivity value of 100% and a specificity value of 100%. To the best of our knowledge, this is the first study in which Raman spectroscopy was used in combination with PCA and classification algorithms as a non-invasive method applied on blood sera for the diagnosis of endometriosis.

Indexed as

Spectrum Analysis, RamanAdultAlgorithmsEndometriosisFemaleHumansPredictive Value of TestsPrincipal Component AnalysisReproducibility of ResultsSensitivity and SpecificitySupport Vector Machine

Identifiers

PMID31875014
PMCPMC6930314
OpenAlexW2996900882

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.