Evidence map›Paper›PMID 31874862›Full record

ArticleLife science alliance2020

In vivo and in vitro knockout system labelled using fluorescent protein via microhomology-mediated end joining.

Shota Katayama, Kota Sato, Toru Nakazawa

Abstract read
In one paragraph

Article in Life science alliance, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Article
  3. Efficient genome editing in medaka (Journal of Zhejiang University. Science. B · 2024
    Article
  4. Article
  5. Article
  6. Article
  7. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Shota KatayamaDepartment of Advanced Ophthalmic Medicine, Tohoku University Graduate School of Medicine, Miyagi, Japan.ORCID 0000-0002-0078-3207
Kota SatoDepartment of Ophthalmology, Tohoku University Graduate School of Medicine, Miyagi, Japan.
Toru NakazawaDepartment of Advanced Ophthalmic Medicine, Tohoku University Graduate School of Medicine, Miyagi, Japan ntoru@oph.med.tohoku.ac.jp.ORCID 0000-0002-5591-4155

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Gene knockout is important for understanding gene function and genetic disorders. The CRISPR/Cas9 system has great potential to achieve this purpose. However, we cannot distinguish visually whether a gene is knocked out and in how many cells it is knocked out among a population of cells. Here, we developed a new system that enables the labelling of knockout cells with fluorescent protein through microhomology-mediated end joining-based knock-in. Using a combination with recombinant adeno-associated virus, we delivered our system into the retina, where the expression of

Indexed as

AnimalsCarnitine O-AcetyltransferaseCell Line, TumorCell SurvivalCRISPR-Associated Protein 9CRISPR-Cas SystemsDependovirusDNA End-Joining RepairGene EditingGene Knock-In TechniquesGene Knockout TechniquesGenetic VectorsGreen Fluorescent ProteinsKelch-Like ECH-Associated Protein 1MaleMiceCarnitine O-AcetyltransferaseCRISPR-Associated Protein 9Green Fluorescent ProteinsKeap1 protein, mouseKelch-Like ECH-Associated Protein 1

Identifiers

PMID31874862
PMCPMC6932181

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.