ArticleBMC genomics2019
The transcriptome variations of Panaxnotoginseng roots treated with different forms of nitrogen fertilizers.
Article in BMC genomics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.
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Who cites it
12 citing papers in PubMed.
- RNA-seq reveals the gene expression in patterns in Populus × euramericana 'Neva' plantation under different precision water and fertilizer-intensive management.BMC plant biology · 2024Article
- Review
- The Potential Relevance of PnDREBs to Panax notoginseng Nitrogen Sensitiveness.Biochemical genetics · 2024Article
- Article
- Deep application of controlled-release urea increases the yield and saponin content ofFrontiers in plant science · 2024Article
- Improving grape fruit quality through soil conditioner: Insights from RNA-seq analysis of Cabernet Sauvignon roots.Open life sciences · 2024Article
- Transcriptome and Metabolome Analyses Reveal Mechanisms Underlying the Response of Quinoa Seedlings to Nitrogen Fertilizers.International journal of molecular sciences · 2023Article
- Multi-algorithm cooperation research of WRKY genes under nitrogen stress in Panax notoginseng.Protoplasma · 2023Article
- Article
- Nitrate alleviates ammonium toxicity in wheat (Plant signaling & behavior · 2021Article
- Genome and transcriptome analysis to understand the role diversification of cytochrome P450 gene under excess nitrogen treatment.BMC plant biology · 2021Article
- Lowering Nitrogen and Increasing Potassium Application Level Can Improve the Yield and Quality ofFrontiers in plant science · 2020Article
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Authors and funding
8 authors.
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Abstract
backgroundThe sensitivity of plants to ammonia is a worldwide problem that limits crop production. Excessive use of ammonium as the sole nitrogen source results in morphological and physiological disorders, and retarded plant growth.
resultsIn this study we found that the root growth of Panax notoginseng was inhibited when only adding ammonium nitrogen fertilizer, but the supplement of nitrate fertilizer recovered the integrity, activity and growth of root. Twelve RNA-seq profiles in four sample groups were produced and analyzed to identify deregulated genes in samples with different treatments. In comparisons to NH[Formula: see text] treated samples, ACLA-3 gene is up-regulated in samples treated with NO[Formula: see text] and with both NH[Formula: see text] and NO[Formula: see text], which is further validated by qRT-PCR in another set of samples. Subsequently, we show that the some key metabolites in the TCA cycle are also significantly enhanced when introducing NO[Formula: see text]. These potentially enhance the integrity and recover the growth of Panax notoginseng roots.
conclusionThese results suggest that the activated TCA cycle, as demonstrated by up-regulation of ACLA-3 and several key metabolites in this cycle, contributes to the increased Panax notoginseng root yield when applying both ammonium and nitrate fertilizer.
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