Evidence map›Paper›PMID 31873949›Full record

ArticleThe New phytologist2020

Host-specific competitiveness to form nodules in Rhizobium leguminosarum symbiovar viciae.

Stéphane Boivin, Nassima Ait Lahmidi, David Sherlock, Maxime Bonhomme, Doriane Dijon, Karine Heulin-Gotty, Antoine Le-Queré, Marjorie Pervent, Marc Tauzin, Georg Carlsson and 9 more

Open access · bronzeAbstract read
In one paragraph

Article in The New phytologist, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
8.1field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 52 citations in OpenAlex.

  1. Article
  2. The Genomic and Phenotypic Characterization of thePlants (Basel, Switzerland) · 2025
    Article
  3. Article
  4. Review
  5. Comparative genomic analysis ofMicrobiology spectrum · 2024
    Article
  6. Article
  7. Review
  8. Review
  9. Review
  10. Article
  11. Article
  12. How Rhizobia Adapt to the Nodule Environment.Journal of bacteriology · 2021
    Article
  13. Defining theGenes · 2021
    Article
  14. Review
  15. Analysis of the Interaction betweenPlants (Basel, Switzerland) · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 7 institutions in 6 countries.

Stéphane BoivinLaboratoire des Symbioses Tropicales et Méditerranéennes (LSTM) INRAE, IRD, CIRAD, University of Montpellier, Montpellier SupAgro, 34398, Montpellier cedex 5, France.
Nassima Ait LahmidiLaboratoire des Symbioses Tropicales et Méditerranéennes (LSTM) INRAE, IRD, CIRAD, University of Montpellier, Montpellier SupAgro, 34398, Montpellier cedex 5, France.
David SherlockDepartment of Biology, University of York, York, YO10 5DD, UK.
Maxime BonhommeLaboratoire de Recherche en Sciences Végétales, CNRS, UPS, Université de Toulouse, 31326, Castanet-Tolosan, France.
Doriane DijonLaboratoire des Symbioses Tropicales et Méditerranéennes (LSTM) INRAE, IRD, CIRAD, University of Montpellier, Montpellier SupAgro, 34398, Montpellier cedex 5, France.
Karine Heulin-GottyLaboratoire des Symbioses Tropicales et Méditerranéennes (LSTM) INRAE, IRD, CIRAD, University of Montpellier, Montpellier SupAgro, 34398, Montpellier cedex 5, France.
Antoine Le-QueréLaboratoire des Symbioses Tropicales et Méditerranéennes (LSTM) INRAE, IRD, CIRAD, University of Montpellier, Montpellier SupAgro, 34398, Montpellier cedex 5, France.ORCID 0000-0001-7470-5730
Marjorie PerventLaboratoire des Symbioses Tropicales et Méditerranéennes (LSTM) INRAE, IRD, CIRAD, University of Montpellier, Montpellier SupAgro, 34398, Montpellier cedex 5, France.
Marc TauzinLaboratoire des Symbioses Tropicales et Méditerranéennes (LSTM) INRAE, IRD, CIRAD, University of Montpellier, Montpellier SupAgro, 34398, Montpellier cedex 5, France.
Georg CarlssonDepartment of Biosystems and Technology, Swedish University of Agricultural Sciences, SE-230 53, Alnarp, Sweden.ORCID 0000-0002-5503-5660
Erik JensenDepartment of Biosystems and Technology, Swedish University of Agricultural Sciences, SE-230 53, Alnarp, Sweden.
Etienne-Pascal JournetAGroécologie, Innovation et teRritoires (AGIR) INRAE, ENSAT, 31326, Castanet-Tolosan, France.ORCID 0000-0003-1704-2998
Raphael Lopez-BellidoDepartamento de Ciencias y Recursos Agrícolas y Forestales, University of Córdoba, 14071, Córdoba, Spain.
Marek SeidenglanzAGRITEC, 78701, Šumperk, Czech Republic.
Jelena MarinkovicInstitute of Field and Vegetable Crops (IFVC), 21000, Novi Sad, Serbia.
Stefano ColellaLaboratoire des Symbioses Tropicales et Méditerranéennes (LSTM) INRAE, IRD, CIRAD, University of Montpellier, Montpellier SupAgro, 34398, Montpellier cedex 5, France.ORCID 0000-0003-3139-6055
Brigitte BrunelLaboratoire des Symbioses Tropicales et Méditerranéennes (LSTM) INRAE, IRD, CIRAD, University of Montpellier, Montpellier SupAgro, 34398, Montpellier cedex 5, France.
Peter YoungDepartment of Biology, University of York, York, YO10 5DD, UK.ORCID 0000-0001-5259-4830
Marc LepetitLaboratoire des Symbioses Tropicales et Méditerranéennes (LSTM) INRAE, IRD, CIRAD, University of Montpellier, Montpellier SupAgro, 34398, Montpellier cedex 5, France.ORCID 0000-0002-0372-5985
Centre de Coopération Internationale en Recherche Agronomique pour le Développement · FRCentre National de la Recherche Scientifique · FRSwedish University of Agricultural Sciences · SEUniversity of York · GBAgritec (Czechia) · CZInstitute of Field and Vegetable Crops · RSUniversity of Córdoba · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Fabeae legumes such as pea and faba bean form symbiotic nodules with a large diversity of soil Rhizobium leguminosarum symbiovar viciae (Rlv) bacteria. However, bacteria competitive to form root nodules (CFN) are generally not the most efficient to fix dinitrogen, resulting in a decrease in legume crop yields. Here, we investigate differential selection by host plants on the diversity of Rlv. A large collection of Rlv was collected by nodule trapping with pea and faba bean from soils at five European sites. Representative genomes were sequenced. In parallel, diversity and abundance of Rlv were estimated directly in these soils using metabarcoding. The CFN of isolates was measured with both legume hosts. Pea/faba bean CFN were associated to Rlv genomic regions. Variations of bacterial pea and/or faba bean CFN explained the differential abundance of Rlv genotypes in pea and faba bean nodules. No evidence was found for genetic association between CFN and variations in the core genome, but variations in specific regions of the nod locus, as well as in other plasmid loci, were associated with differences in CFN. These findings shed light on the genetic control of CFN in Rlv and emphasise the importance of host plants in controlling Rhizobium diversity.

Indexed as

RhizobiumRhizobium leguminosarumVicia fabaPhylogenySymbiosiscompetitivenessgenospeciesnod genesnodulesPisum sativumRhizobium leguminosarum symbiovar viciaesymbiosisVicia faba

Identifiers

PMID31873949
PMCPMC7687279
OpenAlexW2997143217

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.