Evidence map›Paper›PMID 31873151›Full record

ArticleScientific reports2019

Disordered region of cereblon is required for efficient degradation by proteolysis-targeting chimera.

Kidae Kim, Dong Ho Lee, Sungryul Park, Seung-Hyun Jo, Bonsu Ku, Sung Goo Park, Byoung Chul Park, Yeong Uk Jeon, Sunjoo Ahn, Chung Hyo Kang and 6 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 37 citations in OpenAlex.

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  18. E3 Ligase Ligands for PROTACs: How They Were Found and How to Discover New Ones.SLAS discovery : advancing life sciences R & D · 2021
    Review
  19. Review
  20. Current strategies for the design of PROTAC linkers: a critical review.Exploration of targeted anti-tumor therapy · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 5 institutions in 1 country.

Kidae KimDisease Target Structure Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon, 34141, Republic of Korea.ORCID http://orcid.org/0000-0001-5807-7869
Dong Ho LeeTherapeutics & Biotechnology, Korea Research Institute of Chemical Technology, Daejeon, 34114, Republic of Korea.
Sungryul ParkDisease Target Structure Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon, 34141, Republic of Korea.
Seung-Hyun JoDisease Target Structure Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon, 34141, Republic of Korea.
Bonsu KuDisease Target Structure Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon, 34141, Republic of Korea.
Sung Goo ParkDisease Target Structure Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon, 34141, Republic of Korea.
Byoung Chul ParkDisease Target Structure Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon, 34141, Republic of Korea.
Yeong Uk JeonTherapeutics & Biotechnology, Korea Research Institute of Chemical Technology, Daejeon, 34114, Republic of Korea.
Sunjoo AhnTherapeutics & Biotechnology, Korea Research Institute of Chemical Technology, Daejeon, 34114, Republic of Korea.
Chung Hyo KangBio & Drug Discovery Division, Korea Research Institute of Chemical Technology, Daejeon, 34114, Republic of Korea.
Daehee HwangDepartment of Biological Sciences, Seoul National University, Seoul, 08826, Republic of Korea.
Sehyun ChaeKorea Brain Bank, Korea Brain Research Institute, Daegu, 41062, Republic of Korea.
Jae Du HaTherapeutics & Biotechnology, Korea Research Institute of Chemical Technology, Daejeon, 34114, Republic of Korea.
Sunhong KimDisease Target Structure Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon, 34141, Republic of Korea. sunhong@kribb.re.kr.ORCID http://orcid.org/0000-0002-1782-6613
Jong Yeon HwangTherapeutics & Biotechnology, Korea Research Institute of Chemical Technology, Daejeon, 34114, Republic of Korea. jyhwang@krict.re.kr.
Jeong-Hoon KimDisease Target Structure Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon, 34141, Republic of Korea. jhoonkim@kribb.re.kr.
Korea Research Institute of Bioscience and Biotechnology · KRKorea Research Institute of Chemical Technology · KRChungnam National University · KRKorea Brain Research Institute · KRSeoul National University · KR

Funding

MOLECULAR CLONING AND REGULATION OF MAMMASTATINK08CA001511 · NCI · UNIVERSITY OF PENNSYLVANIA · PI WEBER, BARBARA L · 1990 to 1994
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6 · The paper itself

Abstract

Proteolysis targeting chimeras (PROTACs) are an emerging strategy for promoting targeted protein degradation by inducing the proximity between targeted proteins and E3 ubiquitin ligases. Although successful degradation of numerous proteins by PROTACs has been demonstrated, the elements that determine the degradability of PROTAC-targeted proteins have not yet been explored. In this study, we developed von Hippel-Lindau-Cereblon (VHL-CRBN) heterodimerizing PROTACs that induce the degradation of CRBN, but not VHL. A quantitative proteomic analysis further revealed that VHL-CRBN heterodimerizing PROTACs induced the degradation of CRBN, but not the well-known immunomodulatory drug (IMiD) neo-substrates, IKAROS family zinc finger 1 (IKZF1) and -3 (IZKF3). Moreover, truncation of disordered regions of CRBN and the androgen receptor (AR) attenuated their PROTAC-induced degradation, and attachment of the disordered region to stable CRBN or AR facilitated PROTAC-induced degradation. Thus, these results suggest that the intrinsically disordered region of targeted proteins is essential for efficient proteolysis, providing a novel criterion for choosing degradable protein targets.

Indexed as

ProteolysisAdaptor Proteins, Signal TransducingHEK293 CellsHumansIkaros Transcription FactorJurkat CellsProtein DomainsRecombinant Fusion ProteinsUbiquitin-Protein LigasesAdaptor Proteins, Signal TransducingCRBN protein, humanIkaros Transcription FactorIKZF1 protein, humanIKZF3 protein, humanRecombinant Fusion ProteinsUbiquitin-Protein Ligases

Identifiers

PMID31873151
PMCPMC6928225
OpenAlexW2995488282

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.