Evidence map›Paper›PMID 31873148›Full record

ArticleScientific reports2019

Genetic association of E26 transformation specific sequence 1 polymorphisms with the susceptibility of primary biliary cholangitis in China.

Huan Xu, Qian Niu, Zhenzhen Su, Fang Wang, Junlong Zhang, Bin Yang, Zhuochun Huang

Abstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Huan XuDepartment of Laboratory Medicine, West China Hospital, Sichuan University, Chengdu, China.
Qian NiuDepartment of Laboratory Medicine, West China Hospital, Sichuan University, Chengdu, China.
Zhenzhen SuDepartment of Laboratory Medicine, West China Hospital, Sichuan University, Chengdu, China.
Fang WangDepartment of Laboratory Medicine, The Second Affiliated Hospital, Guizhou Medical University, Guizhou, China.
Junlong ZhangDepartment of Laboratory Medicine, West China Hospital, Sichuan University, Chengdu, China.
Bin YangDepartment of Laboratory Medicine, West China Hospital, Sichuan University, Chengdu, China.
Zhuochun HuangDepartment of Laboratory Medicine, West China Hospital, Sichuan University, Chengdu, China. huangzcscu@163.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Primary biliary cholangitis (PBC) is a chronic and cholestatic liver disease characterized by an autoimmune-mediated destruction of intrahepatic bile ducts. E26 transformation specific sequence 1 (ETS-1) is a transcription factor regulating the expression of various immune-related genes. The aim of our study was to identify the associations between the gene polymorphisms of ETS-1 with the susceptibility and clinical characteristics of PBC in Chinese Han population. Three single nucleotide polymorphisms (rs4937333, rs11221332 and rs73013527) of ETS-1 were selected based on relevant studies. Genotyping was executed with polymerase chain reaction-high resolution melting (PCR-HRM) assay. SNP rs4937333 of ETS-1 was prominent correlation with the susceptibility of PBC (P = 0.007, OR = 1.44, 95%CI = 1.10-1.88). For rs4937333, PBC patients carrying the allele T assumed high-level TP (P = 0.020), and homozygous genotype TT assumed low-level RDW (P = 0.033). For rs11221332, PBC patients carrying the allele T assumed high-level TP and HDLC (P = 0.004, P = 0.015, respectively). For rs73013527, PBC patients carrying the allele T assumed low-level PLT (P = 0.002), and homozygous genotype TT assumed high-level RDW (P = 0.021). In conclusion, Gene polymorphisms of ETS-1 present relevant with the susceptibility of PBC, and affect the expression of TP, HDLC, PLT and RDW concentrations in patients with PBC.

Indexed as

Polymorphism, Single NucleotideAdultAgedAsian PeopleCase-Control StudiesChinaFemaleGene FrequencyGenetic Association StudiesGenetic Predisposition to DiseaseHaplotypesHumansLinkage DisequilibriumLiver Cirrhosis, BiliaryMaleMiddle AgedETS1 protein, humanProto-Oncogene Protein c-ets-1

Identifiers

PMID31873148
PMCPMC6927954

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