Evidence map›Paper›PMID 31872947›Full record

ArticleMolecular plant pathology2020

Single gene enables plant pathogenic Pectobacterium to overcome host-specific chemical defence.

Tijs J M van den Bosch, Outi Niemi, Cornelia U Welte

Open access · goldAbstract read
In one paragraph

Article in Molecular plant pathology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
3.5field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 34 citations in OpenAlex.

  1. Article
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  3. ISME communications · 2026
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  5. Review
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  7. Article
  8. Review
  9. Review
  10. A Switch from Latent to Typical Infection duringInternational journal of molecular sciences · 2023
    Article
  11. Review
  12. Article
  13. Article
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  15. Article
  16. Review
  17. Article
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  19. Article
  20. The Microbial Diversity of Cabbage PestFrontiers in microbiology · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 2 countries.

Tijs J M van den BoschDepartment of Microbiology, Institute for Water and Wetland Research, Radboud University, Nijmegen, Netherlands.
Outi NiemiViikki Plant Science Centre, Faculty of Biological and Environmental Sciences, University of Helsinki, Finland.
Cornelia U WelteDepartment of Microbiology, Institute for Water and Wetland Research, Radboud University, Nijmegen, Netherlands.ORCID 0000-0002-1568-8878
Radboud University Nijmegen · NLUniversity of Helsinki · FI

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Plants of the Brassicales order, including Arabidopsis and many common vegetables, produce toxic isothiocyanates to defend themselves against pathogens. Despite this defence, plant pathogenic microorganisms like Pectobacterium cause large yield losses in fields and during storage of crops. The bacterial gene saxA was previously found to encode isothiocyanate hydrolase that degrades isothiocyanates in vitro. Here we demonstrate in planta that saxA is a virulence factor that can overcome the chemical defence system of Brassicales plants. Analysis of the distribution of saxA genes in Pectobacterium suggests that saxA from three different phylogenetic origins are present within this genus. Deletion of saxA genes representing two of the most common classes from P. odoriferum and P. versatile resulted in significantly reduced virulence on Arabidopsis thaliana and Brassica oleracea. Furthermore, expressing saxA from a plasmid in a potato-specific P. parmentieri strain that does not naturally harbour this gene significantly increased the ability of the strain to macerate Arabidopsis. These findings suggest that a single gene may have a significant role in defining the host range of a plant pathogen.

Indexed as

Genes, BacterialArabidopsisIsothiocyanatesPectobacteriumPhylogenyPlasmidsVirulenceVirulence FactorsIsothiocyanatesisothiocyanic acidVirulence FactorsArabidopsishost-specific virulenceisothiocyanate hydrolasePectobacteriumsoft rot

Identifiers

PMID31872947
PMCPMC7036374
OpenAlexW2997695194

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.