Evidence map›Paper›PMID 31872853›Full record

ArticleClinical infectious diseases : an official publication of the Infectious Diseases Society of America2020

Bloodstream Infections With a Novel Nontuberculous Mycobacterium Involving 52 Outpatient Oncology Clinic Patients-Arkansas, 2018.

Sarah M Labuda, Kelley Garner, Michael Cima, Heather Moulton-Meissner, Alison Laufer Halpin, Nadege Charles-Toney, Peter Yu, Erin Bolton, Reid Pierce, Matthew B Crist and 10 more

Open access · greenAbstract read
In one paragraph

Article in Clinical infectious diseases : an official publication of the Infectious Diseases Society of America, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.2field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 5 institutions in 1 country.

Sarah M LabudaEpidemic Intelligence Service, Division of Scientific Education and Professional Development, Centers for Disease Control and Prevention, Atlanta, Georgia, USA.
Kelley GarnerArkansas Department of Health, Little Rock, Arkansas, USA.
Michael CimaArkansas Department of Health, Little Rock, Arkansas, USA.
Heather Moulton-MeissnerDivision of Healthcare Quality Promotion, Centers for Disease Control and Prevention, Atlanta, Georgia, USA.
Alison Laufer HalpinDivision of Healthcare Quality Promotion, Centers for Disease Control and Prevention, Atlanta, Georgia, USA.
Nadege Charles-ToneyDivision of Healthcare Quality Promotion, Centers for Disease Control and Prevention, Atlanta, Georgia, USA.
Peter YuJefferson Regional Medical Center, Pine Bluff, Arkansas, USA.
Erin BoltonJefferson Regional Medical Center, Pine Bluff, Arkansas, USA.
Reid PierceJefferson Regional Medical Center, Pine Bluff, Arkansas, USA.
Matthew B CristDivision of Healthcare Quality Promotion, Centers for Disease Control and Prevention, Atlanta, Georgia, USA.
Danica GomesDivision of Healthcare Quality Promotion, Centers for Disease Control and Prevention, Atlanta, Georgia, USA.
Paige GableDivision of Healthcare Quality Promotion, Centers for Disease Control and Prevention, Atlanta, Georgia, USA.
Gillian McAllisterDivision of Healthcare Quality Promotion, Centers for Disease Control and Prevention, Atlanta, Georgia, USA.
Adrian LawsinDivision of Healthcare Quality Promotion, Centers for Disease Control and Prevention, Atlanta, Georgia, USA.
Hollis HoustonDivision of Healthcare Quality Promotion, Centers for Disease Control and Prevention, Atlanta, Georgia, USA.
Naveen PatilArkansas Department of Health, Little Rock, Arkansas, USA.
J Gary WheelerArkansas Department of Health, Little Rock, Arkansas, USA.
Robert BradsherUniversity of Arkansas for the Medical Sciences, Little Rock, Arkansas, USA.
Keyur VyasUniversity of Arkansas for the Medical Sciences, Little Rock, Arkansas, USA.
Dirk HaselowArkansas Department of Health, Little Rock, Arkansas, USA.
Centers for Disease Control and Prevention · USArkansas Department of Health · USRegional Medical Center · USUniversity of Arkansas for Medical Sciences · USUnited States Public Health Service · US

Funding

Intramural CDC HHS CC999999
6 · The paper itself

Abstract

backgroundIn July 2018, the Arkansas Department of Health (ADH) was notified by hospital A of 3 patients with bloodstream infections (BSIs) with a rapidly growing nontuberculous Mycobacterium (NTM) species; on 5 September 2018, 6 additional BSIs were reported. All were among oncology patients at clinic A. We investigated to identify sources and to prevent further infections.

methodsADH performed an onsite investigation at clinic A on 7 September 2018 and reviewed patient charts, obtained environmental samples, and cultured isolates. The isolates were sequenced (whole genome, 16S, rpoB) by the Centers for Disease Control and Prevention to determine species identity and relatedness.

resultsBy 31 December 2018, 52 of 151 (34%) oncology patients with chemotherapy ports accessed at clinic A during 22 March-12 September 2018 had NTM BSIs. Infected patients received significantly more saline flushes than uninfected patients (P < .001) during the risk period. NTM grew from 6 unused saline flushes compounded by clinic A. The identified species was novel and designated Mycobacterium FVL 201832. Isolates from patients and saline flushes were highly related by whole-genome sequencing, indicating a common source. Clinic A changed to prefilled saline flushes on 12 September as recommended.

conclusionsMycobacterium FVL 201832 caused BSIs in oncology clinic patients. Laboratory data allowed investigators to rapidly link infections to contaminated saline flushes; cooperation between multiple institutions resulted in timely outbreak resolution. New state policies being considered because of this outbreak include adding extrapulmonary NTM to ADH's reportable disease list and providing more oversight to outpatient oncology clinics.

Indexed as

Mycobacterium Infections, NontuberculousNeoplasmsSepsisArkansasHumansNontuberculous MycobacteriaOutpatientshealthcare-associated infectionsnontuberculous mycobacteriaoutbreak investigation

Identifiers

PMID31872853
PMCPMC7938859
OpenAlexW2996950522

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.