Evidence map›Paper›PMID 31872761›Full record

ArticleChemical research in toxicology2020

Structure Dependent Determination of Organophosphate Targets in Mammalian Tissues Using Activity-Based Protein Profiling.

Vivian S Lin, Regan F Volk, Adrian J DeLeon, Lindsey N Anderson, Samuel O Purvine, Anil K Shukla, Hans C Bernstein, Jordan N Smith, Aaron T Wright

Open access · greenAbstract read
In one paragraph

Article in Chemical research in toxicology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.7field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 2 countries.

Vivian S LinBiological Sciences Division , Pacific Northwest National Laboratory , Richland , Washington 99354 , United States.ORCID 0000-0001-9159-0031
Regan F VolkBiological Sciences Division , Pacific Northwest National Laboratory , Richland , Washington 99354 , United States.
Adrian J DeLeonBiological Sciences Division , Pacific Northwest National Laboratory , Richland , Washington 99354 , United States.
Lindsey N AndersonBiological Sciences Division , Pacific Northwest National Laboratory , Richland , Washington 99354 , United States.
Samuel O PurvineEnvironmental Molecular Sciences Laboratory , Pacific Northwest National Laboratory , Richland , Washington 99354 , United States.ORCID 0000-0002-2257-2400
Anil K ShuklaEnvironmental Molecular Sciences Laboratory , Pacific Northwest National Laboratory , Richland , Washington 99354 , United States.
Hans C BernsteinBiological Sciences Division , Pacific Northwest National Laboratory , Richland , Washington 99354 , United States.ORCID 0000-0003-2913-7708
Jordan N SmithBiological Sciences Division , Pacific Northwest National Laboratory , Richland , Washington 99354 , United States.ORCID 0000-0003-3151-2810
Aaron T WrightBiological Sciences Division , Pacific Northwest National Laboratory , Richland , Washington 99354 , United States.ORCID 0000-0002-3172-5253
Pacific Northwest National Laboratory · US

Funding

Equipment Supplement Request for a Research Resource for Ultra-sensitive High Throughput ProteomicsP41GM103493 · NIGMS · BATTELLE PACIFIC NORTHWEST LABORATORIES · PI SMITH, RICHARD D · 2012 to 2022
$22.6M
NIGMS NIH HHS P41 GM103493
6 · The paper itself

Abstract

Acute and chronic exposures to organophosphates (OPs), including agricultural pesticides, industrial chemicals, and chemical warfare agents, remain a significant worldwide health risk. The mechanisms by which OPs alter development and cognition in exposed individuals remain poorly understood, in part due to the large number of structurally diverse OPs and the wide range of affected proteins and signaling pathways. To investigate the influence of structure on OP targets in mammalian systems, we have developed a series of probes for activity-based protein profiling (ABPP) featuring two distinct reactive groups that mimic OP chemical reactivity. FOP features a fluorophosphonate moiety, and PODA and CODA utilize a dialkynyl phosphate ester; both reactive group types target serine hydrolase activity. As the oxon represents the highly reactive and toxic functional group of many OPs, the new probes described herein enhance our understanding of tissue-specific reactivity of OPs. Chemoproteomic analysis of mouse tissues treated with the probes revealed divergent protein profiles, demonstrating the influence of probe structure on protein targeting. These targets also vary in sensitivity toward different OPs. The simultaneous use of multiple probes in ABPP experiments may therefore offer more comprehensive coverage of OP targets; FOP consistently labeled more targets in both brain and liver than PODA or CODA, suggesting the dialkyne warhead is more selective for enzymes in major signaling pathways than the more reactive fluorophosphonate warhead. Additionally, the probes can be used to assess reactivation of OP-inhibited enzymes by N-oximes and may serve as diagnostic tools for screening of therapeutic candidates in a panel of protein targets. These applications will help clarify the short- and long-term effects of OP toxicity beyond acetylcholinesterase inhibition, investigate potential points of convergence for broad spectrum therapeutic development, and support future efforts to screen candidate molecules for efficacy in various model systems.

Indexed as

AcetylcholinesteraseAnimalsBrainCholinesterase InhibitorsDose-Response Relationship, DrugElectrophorusLiverMiceMolecular StructureOrganophosphatesAcetylcholinesteraseCholinesterase InhibitorsOrganophosphates

Identifiers

PMID31872761
PMCPMC9014469
OpenAlexW2997602986

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.