Evidence map›Paper›PMID 31868927›Full record

ArticleMedical physics2020

A fast deep learning approach for beam orientation optimization for prostate cancer treated with intensity-modulated radiation therapy.

Azar Sadeghnejad Barkousaraie, Olalekan Ogunmolu, Steve Jiang, Dan Nguyen

Abstract read
In one paragraph

Article in Medical physics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Advances in Automated Treatment Planning.Seminars in radiation oncology · 2022
    Review
  5. Review
  6. A Survey on Deep Learning for Precision Oncology.Diagnostics (Basel, Switzerland) · 2022
    Review
  7. Article
  8. Article
  9. Review
  10. Article
  11. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Azar Sadeghnejad BarkousaraieMedical Artificial Intelligence and Automation (MAIA) Laboratory, Department of Radiation Oncology, UT Southwestern Medical Center, Dallas, TX, USA.
Olalekan OgunmoluMedical Artificial Intelligence and Automation (MAIA) Laboratory, Department of Radiation Oncology, UT Southwestern Medical Center, Dallas, TX, USA.
Steve JiangMedical Artificial Intelligence and Automation (MAIA) Laboratory, Department of Radiation Oncology, UT Southwestern Medical Center, Dallas, TX, USA.
Dan NguyenMedical Artificial Intelligence and Automation (MAIA) Laboratory, Department of Radiation Oncology, UT Southwestern Medical Center, Dallas, TX, USA.

Funding

Intelligent treatment planning for cancer radiotherapyR01CA237269 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI JIA, XUN, JIANG, STEVE BIN · 2019 to 2023
$2.5M
Cancer Prevention and Research Institute of Texas RP150485Cancer Prevention and Research Institute of Texas RP160661NCI NIH HHS R01 CA237269NIH HHS 1R01CA237269-01
6 · The paper itself

Abstract

purposeBeam orientation selection, whether manual or protocol-based, is the current clinical standard in radiation therapy treatment planning, but it is tedious and can yield suboptimal results. Many algorithms have been designed to optimize beam orientation selection because of its impact on treatment plan quality, but these algorithms suffer from slow calculation of the dose influence matrices of all candidate beams. We propose a fast beam orientation selection method, based on deep learning neural networks (DNN), capable of developing a plan comparable to those developed by the state-of-the-art column generation (CG) method. Our model's novelty lies in its supervised learning structure (using CG to teach the network), DNN architecture, and ability to learn from anatomical features to predict dosimetrically suitable beam orientations without using dosimetric information from the candidate beams. This may save hours of computation.

methodsA supervised DNN is trained to mimic the CG algorithm, which iteratively chooses beam orientations one-by-one by calculating beam fitness values based on Karush-Kush-Tucker optimality conditions at each iteration. The DNN learns to predict these values. The dataset contains 70 prostate cancer patients - 50 training, 7 validation, and 13 test patients - to develop and test the model. Each patient's data contains 6 contours: PTV, body, bladder, rectum, and left and right femoral heads. Column generation was implemented with a GPU-based Chambolle-Pock algorithm, a first-order primal-dual proximal-class algorithm, to create 6270 plans. The DNN trained over 400 epochs, each with 2500 steps and a batch size of 1, using the Adam optimizer at a learning rate of 1 × 10

resultsThe average and standard deviation of training, validation, and testing loss functions among the six folds were 0.62 ± 0.09%, 1.04 ± 0.06%, and 1.44 ± 0.11%, respectively. Using CG and supervised DNN, we generated two sets of plans for each scenario in the test set. The proposed method took at most 1.5 s to select a set of five beam orientations and 300 s to calculate the dose influence matrices for 5 beams and finally 20 s to solve the fluence map optimization (FMO). However, CG needed around 15 h to calculate the dose influence matrices of all beams and at least 400 s to solve both the beam orientation selection and FMO problems. The differences in the dose coverage of PTV between plans generated by CG and by DNN were 0.2%. The average dose differences received by organs at risk were between 1 and 6 percent: Bladder had the smallest average difference in dose received (0.956 ± 1.184%), then Rectum (2.44 ± 2.11%), Left Femoral Head (6.03 ± 5.86%), and Right Femoral Head (5.885 ± 5.515%). The dose received by Body had an average difference of 0.10 ± 0.1% between the generated treatment plans.

conclusionsWe developed a fast beam orientation selection method based on a DNN that selects beam orientations in seconds and is therefore suitable for clinical routines. In the training phase of the proposed method, the model learns the suitable beam orientations based on patients' anatomical features and omits time intensive calculations of dose influence matrices for all possible candidate beams. Solving the FMO to get the final treatment plan requires calculating dose influence matrices only for the selected beams.

Indexed as

Deep LearningRadiotherapy, Intensity-ModulatedHumansMaleProstatic NeoplasmsRadiotherapy Planning, Computer-AssistedTime Factorsbeam orientation optimizationcolumn generationdeep neural networkintensity-modulated radiation therapyprostate cancer

Identifiers

PMID31868927
PMCPMC7849631

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.