Evidence map›Paper›PMID 31868237›Full record

ArticleJournal of cellular physiology2020

The epigenetic reader Brd4 is required for osteoblast differentiation.

Christopher R Paradise, M Lizeth Galvan, Eva Kubrova, Sierra Bowden, Esther Liu, Mason F Carstens, Roman Thaler, Gary S Stein, Andre J van Wijnen, Amel Dudakovic

Open access · greenAbstract read
In one paragraph

Article in Journal of cellular physiology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 26 citations in OpenAlex.

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  14. Bone & joint research · 2021
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Christopher R ParadiseMayo Clinic Graduate School of Biomedical Sciences, Mayo Clinic, Rochester, Minnesota.ORCID 0000-0002-5882-709X
M Lizeth GalvanDepartment of Orthopedic Surgery, Mayo Clinic, Rochester, Minnesota.
Eva KubrovaDepartment of Orthopedic Surgery, Mayo Clinic, Rochester, Minnesota.
Sierra BowdenDepartment of Orthopedic Surgery, Mayo Clinic, Rochester, Minnesota.
Esther LiuDepartment of Orthopedic Surgery, Mayo Clinic, Rochester, Minnesota.
Mason F CarstensDepartment of Orthopedic Surgery, Mayo Clinic, Rochester, Minnesota.
Roman ThalerDepartment of Orthopedic Surgery, Mayo Clinic, Rochester, Minnesota.
Gary S SteinDepartment of Biochemistry, University of Vermont College of Medicine, Burlington, Vermont.ORCID 0000-0001-8762-5422
Andre J van WijnenCenter for Regenerative Medicine, Mayo Clinic, Rochester, Minnesota.ORCID 0000-0002-4458-0946
Amel DudakovicDepartment of Orthopedic Surgery, Mayo Clinic, Rochester, Minnesota.
Mayo Clinic · USUniversity of Vermont · US

Funding

CONTROL OF OSTEOBLAST PROLIFERATION AND DIFFERENTIATIONR01AR039588 · NIAMS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI LIAN, JANE B., STEIN, GARY S. · 1990 to 2019
$8.0M
Molecular Control of Bone FormationR01AR049069 · NIAMS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI WESTENDORF, JENNIFER J · 2003 to 2021
$5.8M
Chromatin Organization Regulates OsteogenesisR01DE029311 · NIDCR · UNIVERSITY OF VERMONT & ST AGRIC COLLEGE · PI LIAN, JANE B., STEIN, GARY S. · 2020 to 2024
$2.5M
Mayo Clinic Career Development Award in Orthopedics to ADNIAMS NIH HHS R01 AR039588NIAMS NIH HHS R01 AR049069NIAMS NIH HHS R01 AR069049 to AvWNIDCR NIH HHS R01 DE029311
6 · The paper itself

Abstract

Transcription networks and epigenetic mechanisms including DNA methylation, histone modifications, and noncoding RNAs control lineage commitment of multipotent mesenchymal progenitor cells. Proteins that read, write, and erase histone tail modifications curate and interpret the highly intricate histone code. Epigenetic reader proteins that recognize and bind histone marks provide a crucial link between histone modifications and their downstream biological effects. Here, we investigate the role of bromodomain-containing (BRD) proteins, which recognize acetylated histones, during osteogenic differentiation. Using RNA-sequencing (RNA-seq) analysis, we screened for BRD proteins (n = 40) that are robustly expressed in MC3T3 osteoblasts. We focused functional follow-up studies on Brd2 and Brd4 which are highly expressed in MC3T3 preosteoblasts and represent "bromodomain and extra terminal domain" (BET) proteins that are sensitive to pharmacological agents (BET inhibitors). We show that small interfering RNA depletion of Brd4 has stronger inhibitory effects on osteoblast differentiation than Brd2 loss as measured by osteoblast-related gene expression, extracellular matrix deposition, and alkaline phosphatase activity. Similar effects on osteoblast differentiation are seen with the BET inhibitor +JQ1, and this effect is reversible upon its removal indicating that this small molecule has no lasting effects on the differentiation capacity of MC3T3 cells. Mechanistically, we find that Brd4 binds at known Runx2 binding sites in promoters of bone-related genes. Collectively, these findings suggest that Brd4 is recruited to osteoblast-specific genes and may cooperate with bone-related transcription factors to promote osteoblast lineage commitment and maturation.

Indexed as

3T3 CellsAcetylationAnimalsBinding SitesBromodomain Containing ProteinsCell DifferentiationCore Binding Factor Alpha 1 SubunitDNA MethylationEpigenesis, GeneticHistonesHumansMiceNuclear ProteinsOsteoblastsOsteogenesisProtein DomainsBrd4 protein, mouseBromodomain Containing ProteinsCore Binding Factor Alpha 1 SubunitHistonesNuclear ProteinsRunx2 protein, mouseTranscription FactorsboneBrd4bromodomainepigeneticsosteoblast

Identifiers

PMID31868237
PMCPMC8128078
OpenAlexW2995031312

What OpenQuestion holds

Textmetadata
LicenceTDM
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.