Evidence map›Paper›PMID 31868166›Full record

ArticleeLife2019

Single-cell analysis uncovers that metabolic reprogramming by ErbB2 signaling is essential for cardiomyocyte proliferation in the regenerating heart.

Hessel Honkoop, Dennis Em de Bakker, Alla Aharonov, Fabian Kruse, Avraham Shakked, Phong D Nguyen, Cecilia de Heus, Laurence Garric, Mauro J Muraro, Adam Shoffner and 14 more

Open access · goldAbstract read
In one paragraph

Article in eLife, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 189 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
189citing papers in PubMed, 2 pooled it
11.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

189 citing papers in PubMed, 2 syntheses or guidelines pooled it, 272 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Review
  4. Article
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  6. Article
  7. Signaling pathways regulating cardiac regeneration.Cell regeneration (London, England) · 2026
    Review
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  16. Immune modulation promotes heart regeneration through macrophage and Granulin functions in medaka.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  17. Article
  18. Review
  19. Signal control during tissue regeneration in adult animals.Nature reviews. Molecular cell biology · 2026
    Review
  20. Review

129 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

24 authors at 8 institutions in 4 countries.

Hessel Honkoop *Hubrecht Institute-KNAW and University Medical Center Utrecht, Utrecht, Netherlands.
Dennis Em de Bakker *Hubrecht Institute-KNAW and University Medical Center Utrecht, Utrecht, Netherlands.
Alla AharonovDepartment of Molecular Cell Biology, Weizmann Institute of Science, Rehovot, Israel.
Fabian KruseHubrecht Institute-KNAW and University Medical Center Utrecht, Utrecht, Netherlands.
Avraham ShakkedDepartment of Molecular Cell Biology, Weizmann Institute of Science, Rehovot, Israel.
Phong D NguyenHubrecht Institute-KNAW and University Medical Center Utrecht, Utrecht, Netherlands.
Cecilia de HeusSection Cell Biology, Center for Molecular Medicine, University Medical Center Utrecht, Utrecht University, Utrecht, Netherlands.
Laurence GarricHubrecht Institute-KNAW and University Medical Center Utrecht, Utrecht, Netherlands.
Mauro J MuraroHubrecht Institute-KNAW and University Medical Center Utrecht, Utrecht, Netherlands.
Adam ShoffnerRegeneration Next, Department of Cell Biology, Duke University Medical Center, Durham, United States.
Federico TessadoriHubrecht Institute-KNAW and University Medical Center Utrecht, Utrecht, Netherlands.
Joshua Craiger PetersonLaboratory for Myology, Department of Human Movement Sciences, Faculty of Behavioural and Movement Sciences, Vrije Universiteit Amsterdam, Amsterdam, Netherlands.
Wendy NoortLaboratory for Myology, Department of Human Movement Sciences, Faculty of Behavioural and Movement Sciences, Vrije Universiteit Amsterdam, Amsterdam, Netherlands.
Alberto BertozziInstitute of Biochemistry and Molecular Biology, Ulm University, Ulm, Germany.
Gilbert WeidingerInstitute of Biochemistry and Molecular Biology, Ulm University, Ulm, Germany.ORCID 0000-0003-3599-6760
George PosthumaSection Cell Biology, Center for Molecular Medicine, University Medical Center Utrecht, Utrecht University, Utrecht, Netherlands.
Dominic GrünMax Planck Institute of Immunobiology and Epigenetics, Freiburg, Germany.
Willem J van der LaarseDepartment of Physiology, Institute for Cardiovascular Research, VU University Medical Center, Amsterdam, Netherlands.
Judith KlumpermanSection Cell Biology, Center for Molecular Medicine, University Medical Center Utrecht, Utrecht University, Utrecht, Netherlands.
Richard T JaspersLaboratory for Myology, Department of Human Movement Sciences, Faculty of Behavioural and Movement Sciences, Vrije Universiteit Amsterdam, Amsterdam, Netherlands.ORCID 0000-0002-6951-0952
Kenneth D PossRegeneration Next, Department of Cell Biology, Duke University Medical Center, Durham, United States.
Alexander van OudenaardenHubrecht Institute-KNAW and University Medical Center Utrecht, Utrecht, Netherlands.
Eldad TzahorDepartment of Molecular Cell Biology, Weizmann Institute of Science, Rehovot, Israel.ORCID 0000-0002-5212-9426
Jeroen BakkersHubrecht Institute-KNAW and University Medical Center Utrecht, Utrecht, Netherlands.ORCID 0000-0002-9418-0422
University Medical Center Utrecht · NLUtrecht University · NLVrije Universiteit Amsterdam · NLWeizmann Institute of Science · ILDuke Medical Center · USUniversität Ulm · DEAmsterdam UMC Location Vrije Universiteit Amsterdam · NLMax Planck Institute of Immunobiology and Epigenetics · DE

Funding

Training Program in Developmental & Stem Cell BiologyT32HD040372 · NICHD · DUKE UNIVERSITY · PI Terry H Lechler · 2001 to 2026
$8.9M
Regulation of Myocardial Regeneration in ZebrafishR01HL081674 · NHLBI · DUKE UNIVERSITY · PI POSS, KENNETH D · 2005 to 2019
$6.6M
Identification and application of regulatory elements for heart regenerationR01HL136182 · NHLBI · DUKE UNIVERSITY · PI BLACK, BRIAN L, POSS, KENNETH D · 2017 to 2020
$3.1M
Regulation of the Epicardial Injury Response During Heart Regeneration in ZebrafishR01HL131319 · NHLBI · DUKE UNIVERSITY · PI POSS, KENNETH D · 2016 to 2019
$1.6M
Phenotypic plasticity associated with inhibition of HSP90R15CA186017 · NCI · MARSHALL UNIVERSITY · PI SOLLARS, VINCENT E · 2014 to 2014
$432k
Deutsche Forschungsgemeinschaft 251293561Deutsche Forschungsgemeinschaft 316249678Deutsche Forschungsgemeinschaft 414077062Dutch Research Council 016.186.017-3ERA-CVD JCT2016-40-080ERC AdG788194ERC StG281289European Molecular Biology Organization ALTF1129-2015Fondation Leducq Transatlantic Network of Excellence 15CVD03Human Frontier Science Program LT001404/2017-LNederlandse Organisatie voor Wetenschappelijk Onderzoek 016.186.017-3Netherlands Heart Foundation NHS/CVON Cobra3NHLBI NIH HHS R01 HL081674NHLBI NIH HHS R01 HL131319NHLBI NIH HHS R01 HL136182NICHD NIH HHS T32 HD040372NIH Clinical Center RO1 HL081674
6 · The paper itself

Abstract

While the heart regenerates poorly in mammals, efficient heart regeneration occurs in zebrafish. Studies in zebrafish have resulted in a model in which preexisting cardiomyocytes dedifferentiate and reinitiate proliferation to replace the lost myocardium. To identify which processes occur in proliferating cardiomyocytes we have used a single-cell RNA-sequencing approach. We uncovered that proliferating border zone cardiomyocytes have very distinct transcriptomes compared to the nonproliferating remote cardiomyocytes and that they resemble embryonic cardiomyocytes. Moreover, these cells have reduced expression of mitochondrial genes and reduced mitochondrial activity, while glycolysis gene expression and glucose uptake are increased, indicative for metabolic reprogramming. Furthermore, we find that the metabolic reprogramming of border zone cardiomyocytes is induced by Nrg1/ErbB2 signaling and is important for their proliferation. This mechanism is conserved in murine hearts in which cardiomyocyte proliferation is induced by activating ErbB2 signaling. Together these results demonstrate that glycolysis regulates cardiomyocyte proliferation during heart regeneration.

Indexed as

Cell ProliferationAnimalsAnimals, Genetically ModifiedCellular ReprogrammingFemaleGene Expression Regulation, DevelopmentalGenes, erbB-2GlycolysisHeartHexokinaseMaleMiceModels, AnimalMyocardiumMyocytes, CardiacNeuregulin-1HexokinaseNeuregulin-1Nrg1 protein, mouseZebrafish Proteinsdevelopmental biologyheartmetabolismmouseneuregulinregenerationregenerative medicinestem cellszebrafish

Identifiers

PMID31868166
PMCPMC7000220
OpenAlexW2995700709

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.