Evidence map›Paper›PMID 31866982›Full record

ArticleFrontiers in microbiology2019

Whole-Genome Sequencing and Bioinformatics as Pertinent Tools to Support

Elvire Berthenet, Lucie Bénéjat, Armelle Ménard, Christine Varon, Sabrina Lacomme, Etienne Gontier, Josette Raymond, Ouahiba Boussaba, Olivier Toulza, Astrid Ducournau and 6 more

Abstract read
In one paragraph

Article in Frontiers in microbiology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. First case report of "New microbes and new infections · 2024
    Article
  2. A Tripartite Efflux System Affects Flagellum Stability inInternational journal of molecular sciences · 2022
    Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Elvire BerthenetFrench National Reference Center for Campylobacters and Helicobacters, Bordeaux, France.
Lucie BénéjatFrench National Reference Center for Campylobacters and Helicobacters, Bordeaux, France.
Armelle MénardUniv. Bordeaux, INSERM, Bordeaux Research in Translational Oncology, BaRITOn, U1053, Bordeaux, France.
Christine VaronUniv. Bordeaux, INSERM, Bordeaux Research in Translational Oncology, BaRITOn, U1053, Bordeaux, France.
Sabrina LacommeCNRS, INSERM, Bordeaux Imaging Center UMS 3420 - US4, Pôle d'Imagerie Électronique, Bordeaux, France.
Etienne GontierCNRS, INSERM, Bordeaux Imaging Center UMS 3420 - US4, Pôle d'Imagerie Électronique, Bordeaux, France.
Josette RaymondBacteriology, Cochin Hospital, Institut Pasteur, University of Paris-Descartes, Paris, France.
Ouahiba BoussabaFrench National Reference Center for Campylobacters and Helicobacters, Bordeaux, France.
Olivier ToulzaClinique Vétérinaire AQUIVET, Eysines, France.
Astrid DucournauFrench National Reference Center for Campylobacters and Helicobacters, Bordeaux, France.
Alice BuissonnièreFrench National Reference Center for Campylobacters and Helicobacters, Bordeaux, France.
Alban GieseUniv. Bordeaux, INSERM, Bordeaux Research in Translational Oncology, BaRITOn, U1053, Bordeaux, France.
Francis MegraudFrench National Reference Center for Campylobacters and Helicobacters, Bordeaux, France.
Emilie BessèdeFrench National Reference Center for Campylobacters and Helicobacters, Bordeaux, France.
Quentin JehanneFrench National Reference Center for Campylobacters and Helicobacters, Bordeaux, France.
Philippe LehoursFrench National Reference Center for Campylobacters and Helicobacters, Bordeaux, France.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The present study describes three putative novel species received at the French National Reference Center for Campylobacters & Helicobacters (CNRCH). The CNRCH 2005/566H strain was isolated in 2005 from the feces of a patient with a hepatocellular carcinoma and gastroenteritis. Strain 48519 was isolated in 2017 from the blood of a male patient suffering from a bacteremia. Strain Cn23e was isolated from a gastric biopsy from a dog suffering from chronic gastritis. Biochemical and growth characteristics and electron microscopy for these three strains were studied. Their genomes were also sequenced.

Indexed as

gyrAHelicobacter genusnovel speciestaxonomywhole-genome sequencing

Identifiers

PMID31866982
PMCPMC6908825

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.