Evidence map›Paper›PMID 31865180›Full record

ArticleTranslational oncology2020

Combined Metabolomics and Genome-Wide Transcriptomics Analyses Show Multiple HIF1α-Induced Changes in Lipid Metabolism in Early Stage Clear Cell Renal Cell Carcinoma.

Johannes C van der Mijn, Leiping Fu, Francesca Khani, Tuo Zhang, Ana M Molina, Christopher E Barbieri, Qiuying Chen, Steven S Gross, Lorraine J Gudas, David M Nanus

Open access · goldAbstract read
In one paragraph

Article in Translational oncology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.4field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 28 citations in OpenAlex.

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  8. Endoplasmic Reticulum Stress in Renal Cell Carcinoma.International journal of molecular sciences · 2023
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 2 countries.

Johannes C van der MijnDepartment of Pharmacology, Weill Cornell Medicine, New York, NY, USA; Department of Medical Oncology, Amsterdam University Medical Center, Amsterdam, the Netherlands.
Leiping FuDepartment of Pharmacology, Weill Cornell Medicine, New York, NY, USA.
Francesca KhaniDepartment of Pathology, Weill Cornell Medicine, New York, NY, USA; Department of Urology, Weill Cornell Medicine, New York, NY, USA.
Tuo ZhangGenomics Resources Core, Weill Cornell Medicine, New York, NY, USA.
Ana M MolinaDivision of Hematology/Oncology, Department of Medicine, Weill Cornell Medicine, New York, NY, USA.
Christopher E BarbieriDepartment of Urology, Weill Cornell Medicine, New York, NY, USA.
Qiuying ChenDepartment of Pharmacology, Weill Cornell Medicine, New York, NY, USA.
Steven S GrossDepartment of Pharmacology, Weill Cornell Medicine, New York, NY, USA.
Lorraine J GudasDepartment of Pharmacology, Weill Cornell Medicine, New York, NY, USA.
David M NanusDivision of Hematology/Oncology, Department of Medicine, Weill Cornell Medicine, New York, NY, USA. Electronic address: dnanus@med.cornell.edu.
Cornell University · USWeill Cornell Medicine · US

Funding

CANCER PHARMACOLOGYT32CA062948 · NCI · WEILL MEDICAL COLL OF CORNELL UNIV · PI LORRAINE J GUDAS · 1994 to 2026
$12.1M
Project 3: Physical and Metabolic Constraints of Cancer Cell InvasionU54CA210184 · NCI · CORNELL UNIVERSITY · PI SCHAFFER, CHRIS B · 2016 to 2020
$10.2M
Gene Nutrient Interactions in Kidney FunctionR01DK113088 · NIDDK · WEILL MEDICAL COLL OF CORNELL UNIV · PI GUDAS, LORRAINE J · 2018 to 2025
$3.7M
NCI NIH HHS T32 CA062948NCI NIH HHS U54 CA210184NIDDK NIH HHS R01 DK113088
6 · The paper itself

Abstract

The accumulation of lipids is a hallmark of human clear cell renal cell carcinoma (ccRCC). Advanced ccRCC tumors frequently show increased lipid biosynthesis, but the regulation of lipid metabolism in early stage ccRCC tumors has not been studied. Here, we performed combined transcriptomics and metabolomics on a previously characterized transgenic mouse model (TRAnsgenic Cancer of the Kidney, TRACK) of early stage ccRCC. We found that in TRACK kidneys, HIF1α activation increases transcripts of lipid receptors (Cd36, ACVRL1), lipid storage genes (Hilpda and Fabp7), and intracellular levels of essential fatty acids, including linoleic acid and linolenic acid. Feeding the TRACK mice a high-fat diet enhances lipid accumulation in the kidneys. These results show that HIF1α increases the uptake and storage of dietary lipids in this early stage ccRCC model. By then analyzing early stage human ccRCC specimens, we found similar increases in CD36 transcripts and increases in linoleic and linolenic acid relative to normal kidney samples. CD36 mRNA levels decreased, while FASN transcript levels increased with increasing ccRCC tumor stage. These results suggest that an increase in the lipid biosynthesis pathway in advanced ccRCC tumors may compensate for a decreased capacity of these advanced ccRCCs to scavenge extracellular lipids.

Identifiers

PMID31865180
PMCPMC6931219
OpenAlexW2995068470

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.