Evidence map›Paper›PMID 31864373›Full record

ArticleRetrovirology2019

HTLV-1 CTCF-binding site is dispensable for in vitro immortalization and persistent infection in vivo.

Michael P Martinez, Xiaogang Cheng, Ancy Joseph, Jacob Al-Saleem, Amanda R Panfil, Marilly Palettas, Wessel P Dirksen, Lee Ratner, Patrick L Green

Open access · goldAbstract read
In one paragraph

Article in Retrovirology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.4field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 23 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Regulation of HTLV-1 transformation.Bioscience reports · 2022
    Review
  10. Review
  11. Article
  12. Review
  13. Review
  14. Article
  15. Review
  16. Epidemiological and molecular profile of blood donors infected with HTLV-1/2 in the state of Pará, northern Brazil.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2021
    Article
  17. Review
  18. Article
  19. CRISPR Genome Editing Applied to the Pathogenic Retrovirus HTLV-1.Frontiers in cellular and infection microbiology · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Michael P MartinezCenter for Retrovirus Research, The Ohio State University, Columbus, OH, USA.
Xiaogang ChengDivision of Oncology, Washington University, St. Louis, MO, USA.
Ancy JosephDivision of Oncology, Washington University, St. Louis, MO, USA.
Jacob Al-SaleemCenter for Retrovirus Research, The Ohio State University, Columbus, OH, USA.
Amanda R PanfilCenter for Retrovirus Research, The Ohio State University, Columbus, OH, USA.
Marilly PalettasCenter for Biostatistics, The Ohio State University, Columbus, OH, USA.
Wessel P DirksenCenter for Retrovirus Research, The Ohio State University, Columbus, OH, USA.
Lee RatnerDivision of Oncology, Washington University, St. Louis, MO, USA.
Patrick L GreenCenter for Retrovirus Research, The Ohio State University, Columbus, OH, USA. green.466@osu.edu.ORCID 0000-0002-0204-562X
The Ohio State University · USWashington University in St. Louis · US

Funding

Role of Inflammation in Tax-mediated TumorigenesisP01CA100730 · NCI · WASHINGTON UNIVERSITY · PI Lee Ratner · 2003 to 2026
$44.8M
PROLIFERATIVE EFFECTS OF HTLV1R01CA063417 · NCI · WASHINGTON UNIVERSITY · PI RATNER, LEE · 1995 to 2017
$3.7M
ROLE OF CTCF IN HTLV-1 PATHOGENESISR21AI126652 · NIAID · WASHINGTON UNIVERSITY · PI RATNER, LEE · 2016 to 2017
$433k
NCI NIH HHS P01 CA100730NCI NIH HHS R01 CA063417NIAID NIH HHS R21 AI126652
6 · The paper itself

Abstract

backgroundHuman T-cell leukemia virus type 1 (HTLV-1) is the etiologic agent of adult T-cell leukemia/lymphoma (ATL) and the neurological disorder HTLV-1-associated myelopathy/tropical spastic paraparesis (HAM/TSP). The exact mechanism(s) through which latency and disease progression are regulated are not fully understood. CCCTC-binding factor (CTCF) is an 11-zinc finger, sequence-specific, DNA-binding protein with thousands of binding sites throughout mammalian genomes. CTCF has been shown to play a role in organization of higher-order chromatin structure, gene expression, genomic imprinting, and serve as a barrier to epigenetic modification. A viral CTCF-binding site (vCTCF-BS) was previously identified within the overlapping p12 (sense) and Hbz (antisense) genes of the HTLV-1 genome. Thus, upon integration, HTLV-1 randomly inserts a vCTCF-BS into the host genome. vCTCF-BS studies to date have focused primarily on HTLV-1 chronically infected or tumor-derived cell lines. In these studies, HTLV-1 was shown to alter the structure and transcription of the surrounding host chromatin through the newly inserted vCTCF-BS. However, the effects of CTCF binding in the early stages of HTLV-1 infection remains unexplored. This study examines the effects of the vCTCF-BS on HTLV-1-induced in vitro immortalization and in vivo viral persistence in infected rabbits.

resultsHTLV-1 and HTLV-1∆CTCF LTR-transactivation, viral particle production, and immortalization capacity were comparable in vitro. The total lymphocyte count, proviral load, and Hbz gene expression were not significantly different between HTLV-1 and HTLV-1∆CTCF-infected rabbits throughout a 12 week study. However, HTLV-1∆CTCF-infected rabbits displayed a significantly decreased HTLV-1-specific antibody response compared to HTLV-1-infected rabbits.

conclusionsMutation of the HTLV-1 vCTCF-BS does not significantly alter T-lymphocyte transformation capacity or early in vivo virus persistence, but results in a decreased HTLV-1-specific antibody response during early infection in rabbits. Ultimately, understanding epigenetic regulation of HTLV-1 gene expression and pathogenesis could provide meaningful insights into mechanisms of immune evasion and novel therapeutic targets.

Indexed as

AnimalsBinding SitesCCCTC-Binding FactorCells, CulturedChromatinCoculture TechniquesEpigenesis, GeneticGene Expression Regulation, ViralGenome, ViralHTLV-I InfectionsHumansHuman T-lymphotropic virus 1Leukocytes, MononuclearMaleRabbitsSpecific Pathogen-Free OrganismsCCCTC-Binding FactorChromatinCTCFHTLV-1ImmortalizationPersistenceRetrovirus

Identifiers

PMID31864373
PMCPMC6925871
OpenAlexW2996546512

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.