Evidence map›Paper›PMID 31863035›Full record

ArticleScientific reports2019

Transcriptome analysis-identified long noncoding RNA CRNDE in maintaining endothelial cell proliferation, migration, and tube formation.

Matthew Moran, Xiao Cheng, Mohamed Sham Shihabudeen Haider Ali, Nishikant Wase, Nghi Nguyen, Weilong Yang, Chi Zhang, Concetta DiRusso, Xinghui Sun

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.5field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 11 citations in OpenAlex.

  1. Role of lncRNAs in pathophysiology of obesity.Current opinion in physiology · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Matthew MoranDepartment of Biochemistry, University of Nebraska - Lincoln, Lincoln, Nebraska, 68588, USA.
Xiao ChengDepartment of Biochemistry, University of Nebraska - Lincoln, Lincoln, Nebraska, 68588, USA.
Mohamed Sham Shihabudeen Haider AliDepartment of Biochemistry, University of Nebraska - Lincoln, Lincoln, Nebraska, 68588, USA.
Nishikant WaseDepartment of Biochemistry, University of Nebraska - Lincoln, Lincoln, Nebraska, 68588, USA.
Nghi NguyenDepartment of Biochemistry, University of Nebraska - Lincoln, Lincoln, Nebraska, 68588, USA.
Weilong YangCenter for Plant Science Innovation, School of Biological Sciences, University of Nebraska - Lincoln, Lincoln, Nebraska, 68588, USA.
Chi ZhangCenter for Plant Science Innovation, School of Biological Sciences, University of Nebraska - Lincoln, Lincoln, Nebraska, 68588, USA.
Concetta DiRussoDepartment of Biochemistry, University of Nebraska - Lincoln, Lincoln, Nebraska, 68588, USA.ORCID http://orcid.org/0000-0001-7388-9152
Xinghui SunDepartment of Biochemistry, University of Nebraska - Lincoln, Lincoln, Nebraska, 68588, USA. xsun17@unl.edu.
University of Nebraska–Lincoln · US

Funding

The role of stress in the fetal origin of obesity and metabolic dysfunctionP20GM104320 · NIGMS · UNIVERSITY OF NEBRASKA LINCOLN · PI ZEMPLENI, JANOS · 2014 to 2024
$24.9M
Molecular Mechanisms of DiseaseT32GM107001 · NIGMS · UNIVERSITY OF NEBRASKA LINCOLN · PI BECKER, DONALD F, BLACK, PAUL N. · 2015 to 2019
$1.0M
NIGMS NIH HHS P20 GM104320NIGMS NIH HHS T32 GM107001U.S. Department of Health & Human Services | NIH | National Institute of General Medical Sciences (NIGMS) 5T32GM107001-04
6 · The paper itself

Abstract

Obesity is a leading risk factor for type-2 diabetes. Diabetes often leads to the dysregulation of angiogenesis, although the mechanism is not fully understood. Previously, long noncoding RNAs (lncRNAs) have been found to modulate angiogenesis. In this study, we asked how the expression levels of lncRNAs change in endothelial cells in response to excessive palmitic acid treatment, an obesity-like condition. Bioinformatics analysis revealed that 305 protein-coding transcripts were upregulated and 70 were downregulated, while 64 lncRNAs were upregulated and 46 were downregulated. Gene ontology and pathway analysis identified endoplasmic reticulum stress, HIF-1 signaling, and Toll-like receptor signaling as enriched after palmitic acid treatment. Moreover, we newly report enrichment of AGE-RAGE signaling pathway in diabetic complications, IL-17 signaling, and cysteine and methionine metabolism by palmitic acid. One lncRNA, Colorectal Neoplasia Differentially Expressed (CRNDE), was selected for further investigation. Palmitic acid induces CRNDE expression by 1.9-fold. We observed that CRNDE knockdown decreases endothelial cell proliferation, migration, and capillary tube formation. These decreases are synergistic under palmitic acid stress. These data demonstrated that lncRNA CRNDE is a regulator of endothelial cell proliferation, migration, and tube formation in response to palmitic acid, and a potential target for therapies treating the complications of obesity-induced diabetes.

Indexed as

Cell MovementCell ProliferationEndothelial CellsFlow CytometryGene Expression Regulation, NeoplasticGene OntologyHumansHuman Umbilical Vein Endothelial CellsMicroRNAsRNA InterferenceRNA, Long NoncodingSequence Analysis, RNASignal TransductionMicroRNAsRNA, Long Noncoding

Identifiers

PMID31863035
PMCPMC6925215
OpenAlexW2996436505

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.