Evidence map›Paper›PMID 31862713›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2020

Two closed ATP- and ADP-dependent conformations in yeast Hsp90 chaperone detected by Mn(II) EPR spectroscopic techniques.

Angeliki Giannoulis, Akiva Feintuch, Yoav Barak, Hisham Mazal, Shira Albeck, Tamar Unger, Feng Yang, Xun-Cheng Su, Daniella Goldfarb

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
2.4field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 52 citations in OpenAlex.

  1. Article
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  5. Article
  6. Hsp90, a team player in protein quality control and the stress response in bacteria.Microbiology and molecular biology reviews : MMBR · 2024
    Review
  7. Structural transitions modulate the chaperone activities of Grp94.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Darobactin B Stabilises a Lateral-Closed Conformation of the BAM Complex inAngewandte Chemie (Weinheim an der Bergstrasse, Germany) · 2023
    Article
  13. Article
  14. Article
  15. Article
  16. Increasing the Modulation Depth of GdThe journal of physical chemistry letters · 2022
    Article
  17. Review
  18. Review
  19. The endoplasmic reticulum chaperone BiP is a closure-accelerating cochaperone of Grp94.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Angeliki GiannoulisDepartment of Chemical and Biological Physics, Weizmann Institute of Science, 76100 Rehovot, Israel.ORCID 0000-0001-8017-5457
Akiva FeintuchDepartment of Chemical and Biological Physics, Weizmann Institute of Science, 76100 Rehovot, Israel.
Yoav BarakDepartment of Chemical Research Support, Weizmann Institute of Science, 76100 Rehovot, Israel.
Hisham MazalDepartment of Chemical and Biological Physics, Weizmann Institute of Science, 76100 Rehovot, Israel.ORCID 0000-0002-2071-9552
Shira AlbeckStructural Proteomics Unit, Department of Life Sciences Core Facilities, Weizmann Institute of Science, 76100 Rehovot, Israel.
Tamar UngerStructural Proteomics Unit, Department of Life Sciences Core Facilities, Weizmann Institute of Science, 76100 Rehovot, Israel.
Feng YangState Key Laboratory of Elemento-Organic Chemistry, College of Chemistry, Collaborative Innovation Center of Chemical Science and Engineering, Nankai University, 300071 Tianjin, China.
Xun-Cheng SuState Key Laboratory of Elemento-Organic Chemistry, College of Chemistry, Collaborative Innovation Center of Chemical Science and Engineering, Nankai University, 300071 Tianjin, China.ORCID 0000-0003-3051-0047
Daniella GoldfarbDepartment of Chemical and Biological Physics, Weizmann Institute of Science, 76100 Rehovot, Israel; daniella.goldfarb@weizmann.ac.il.ORCID 0000-0001-5714-7159
Weizmann Institute of Science · ILNankai University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Hsp90 plays a central role in cell homeostasis by assisting folding and maturation of a large variety of clients. It is a homo-dimer, which functions via hydrolysis of ATP-coupled to conformational changes. Hsp90's conformational cycle in the absence of cochaperones is currently postulated as apo-Hsp90 being an ensemble of "open"/"closed" conformations. Upon ATP binding, Hsp90 adopts an active ATP-bound closed conformation where the N-terminal domains, which comprise the ATP binding site, are in close contact. However, there is no consensus regarding the conformation of the ADP-bound Hsp90, which is considered important for client release. In this work, we tracked the conformational states of yeast Hsp90 at various stages of ATP hydrolysis in frozen solutions employing electron paramagnetic resonance (EPR) techniques, particularly double electron-electron resonance (DEER) distance measurements. Using rigid Gd(III) spin labels, we found the C domains to be dimerized with same distance distribution at all hydrolysis states. Then, we substituted the ATPase Mg(II) cofactor with paramagnetic Mn(II) and followed the hydrolysis state using hyperfine spectroscopy and measured the inter-N-domain distance distributions via Mn(II)-Mn(II) DEER. The point character of the Mn(II) spin label allowed us resolve 2 different closed states: The ATP-bound (prehydrolysis) characterized by a distance distribution having a maximum of 4.3 nm, which broadened and shortened, shifting the mean to 3.8 nm at the ADP-bound state (posthydrolysis). This provides experimental evidence to a second closed conformational state of Hsp90 in solution, referred to as "compact." Finally, the so-called high-energy state, trapped by addition of vanadate, was found structurally similar to the posthydrolysis state.

Indexed as

Adenosine DiphosphateAdenosine TriphosphateElectron Spin Resonance SpectroscopyFungal ProteinsHSP90 Heat-Shock ProteinsManganeseModels, MolecularMutationProtein DomainsSpin LabelsYeastsAdenosine DiphosphateAdenosine TriphosphateFungal ProteinsHSP90 Heat-Shock ProteinsManganeseSpin LabelschaperoneDEEREDNMRENDORHsp90

Identifiers

PMID31862713
PMCPMC6955315
OpenAlexW2995960078

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.