Evidence map›Paper›PMID 31861340›Full record

ArticleInternational journal of molecular sciences2019

Characterization of p53 Family Homologs in Evolutionary Remote Branches of Holozoa.

Martin Bartas, Václav Brázda, Jiří Červeň, Petr Pečinka

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
  2. Article
  3. NAR cancer · 2023
    Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Unpicking the Roles of DNA Damage Protein Kinases in Trypanosomatids.Frontiers in cell and developmental biology · 2021
    Review
  11. Presence and Interactions ofIranian journal of parasitology
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Martin BartasDepartment of Biology and Ecology, University of Ostrava, 710 00 Ostrava, Czech Republic.
Václav BrázdaInstitute of Biophysics of the Czech Academy of Sciences, 612 65 Brno, Czech Republic.ORCID 0000-0003-2837-4226
Jiří ČerveňDepartment of Biology and Ecology, University of Ostrava, 710 00 Ostrava, Czech Republic.
Petr PečinkaDepartment of Biology and Ecology, University of Ostrava, 710 00 Ostrava, Czech Republic.
University of Ostrava · CZCzech Academy of Sciences, Institute of Biophysics · CZ

Funding

EU structural funding Operational Programme Research and Development for innovation CZ.1.05/2.1.00/19.0388Ministry of Education, Youth and Sports of the Czech Republic in the "National Feasibility Program I" project LO1208 TEWEPThe Czech Science Foundation 18-15548SUniversity of Ostrava SGS/09/PrF/2019
6 · The paper itself

Abstract

The p53 family of transcription factors plays key roles in development, genome stability, senescence and tumor development, and p53 is the most important tumor suppressor protein in humans. Although intensively investigated for many years, its initial evolutionary history is not yet fully elucidated. Using bioinformatic and structure prediction methods on current databases containing newly-sequenced genomes and transcriptomes, we present a detailed characterization of p53 family homologs in remote members of the Holozoa group, in the unicellular clades Filasterea, Ichthyosporea and Corallochytrea. Moreover, we show that these newly characterized homologous sequences contain domains that can form structures with high similarity to the human p53 family DNA-binding domain, and some also show similarities to the oligomerization and SAM domains. The presence of these remote homologs demonstrates an ancient origin of the p53 protein family.

Indexed as

Evolution, MolecularMultigene FamilySequence Homology, Amino AcidAmino Acid SequenceDatabases, GeneticEukaryotaExonsIntronsModels, MolecularPhylogenyProtein ConformationProtein Interaction Domains and MotifsTumor Suppressor Protein p53Tumor Suppressor Protein p53evolutionHolozoap53p63p73

Identifiers

PMID31861340
PMCPMC6981761
OpenAlexW2995393338

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.