Evidence map›Paper›PMID 31859362›Full record

ArticleClinical and experimental immunology2020

Chemical chaperones reverse early suppression of regulatory circuits during unfolded protein response in B cells from common variable immunodeficiency patients.

D Bhatt, R C Stan, R Pinhata, M Machado, S Maity, C Cunningham-Rundles, C Vogel, M M de Camargo

Open access · bronzeAbstract read
In one paragraph

Article in Clinical and experimental immunology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.2field-weighted citation impact, top 46% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

D BhattDepartment of Immunology, University of São Paulo, São Paulo, Brazil.ORCID 0000-0003-0923-2353
R C StanDepartment of Immunology, University of São Paulo, São Paulo, Brazil.ORCID 0000-0002-9539-6532
R PinhataDepartment of Immunology, University of São Paulo, São Paulo, Brazil.
M MachadoDepartment of Immunology, University of São Paulo, São Paulo, Brazil.
S MaityCenter for Genomics and Systems Biology, New York University, New York, NY, USA.
C Cunningham-RundlesDepartment of Medicine, Allergy & Immunology, Mount Sinai Medicine School, New York, NY, USA.
C VogelCenter for Genomics and Systems Biology, New York University, New York, NY, USA.
M M de CamargoDepartment of Immunology, University of São Paulo, São Paulo, Brazil.ORCID 0000-0003-2815-125X
Universidade de São Paulo · BRNew York University · USIcahn School of Medicine at Mount Sinai · US

Funding

Regulation of IgA class switching in the intestinal mucosaP01AI061093 · NIAID · MOUNT SINAI SCHOOL OF MEDICINE OF NYU · PI CUNNINGHAM-RUNDLES, CHARLOTTE · 2004 to 2021
$29.8M
Next generation gene expression analysisR35GM127089 · NIGMS · NEW YORK UNIVERSITY · PI Christine Vogel · 2018 to 2026
$4.0M
Robust statistical approaches for decoding protein and mRNA expression regulationR01GM113237 · NIGMS · NEW YORK UNIVERSITY · PI VOGEL, CHRISTINE · 2014 to 2017
$1.5M
NIAID NIH HHS P01 AI061093NIGMS NIH HHS R01 GM113237NIGMS NIH HHS R35 GM127089
6 · The paper itself

Abstract

B cells orchestrate pro-survival and pro-apoptotic inputs during unfolded protein response (UPR) to translate, fold, sort, secrete and recycle immunoglobulins. In common variable immunodeficiency (CVID) patients, activated B cells are predisposed to an overload of abnormally processed, misfolded immunoglobulins. Using highly accurate transcript measurements, we show that expression of UPR genes and immunoglobulin chains differs qualitatively and quantitatively during the first 4 h of chemically induced UPR in B cells from CVID patients and a healthy subject. We tested thapsigargin or tunicamycin as stressors and 4-phenylbutyrate, dimethyl sulfoxide and tauroursodeoxycholic acid as chemical chaperones. We found an early and robust decrease of the UPR upon endoplasmic reticulum (ER) stress in CVID patient cells compared to the healthy control consistent with the disease phenotype. The chemical chaperones increased the UPR in the CVID patient cells in response to the stressors, suggesting that misfolded immunoglobulins were stabilized. We suggest that the AMP-dependent transcription factor alpha branch of the UPR is disturbed in CVID patients, underlying the observed expression behavior.

Indexed as

B-LymphocytesCells, CulturedCommon Variable ImmunodeficiencyDimethyl SulfoxideEndoplasmic Reticulum StressGene Expression ProfilingGene Expression RegulationGene Regulatory NetworksHumansImmunoglobulinsPhenylbutyratesTaurochenodeoxycholic AcidThapsigarginTranscription FactorsTunicamycinUnfolded Protein Response4-phenylbutyric acidDimethyl SulfoxideImmunoglobulinsPhenylbutyratesTaurochenodeoxycholic AcidThapsigarginTranscription FactorsTunicamycinursodoxicoltaurinechaperonescommon variable immunodeficiencyhuman B cellsregulatory circuitsunfolded protein response

Identifiers

PMID31859362
PMCPMC7066380
OpenAlexW2996338100

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.